Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02662 | ATGGCAAACTTGTTAGCTCAGTTACAGTCCATCAAGATTTCATGTGATGGCCTCACCATTGCCGTGAAAGATGTGAGTGATTTGTGGCCTCTTGTCAAGGACAAATTCGACGAACGCCTTCCGTTCCAACGAGCCACATTACACAACAAAAACCGGTATCCGGTCACTGTTGAAAACCTACAAGCTGAGTTTTTGTTAACTACTGACTCAAGGATCAAGAGCCGGGTCCCGCAGGATCAACTGTACTTTTGTTTTCAAGAACCATATGCAACTGTGGTTCTTGTAGCATGTGAGGATCTAGACGAGTTCAAGACGGTACTAAAACCACGTCTGAAGTTAATTTTGCAAAATGAAGAGGAGTGGTTCATTGTGTTTGTGTCCAAAGCTAAATCGGACAAGGACCCCGTGAGCAAGATGGAAAAGAAGGTTTATGCCAGACTTGAAGTTGATTTCAATTCAAGAAGGAGAGATAGGTGCTGCAAGTTTGACTTATTTGACAGTGAAGAACCCTTTTGGGAAGATTTTGAACTCAAAACCATGGAGTGCATCCGAAACACTCTCGATAGGCGTGTCCAGTTCTACGAGGACGAGATTCGTAAGCACAATGAACAACGGTTATCGCCCACTTGGAGCTTTTGTGACTTTTTCATCCTCAAAGAATGCCTGGCATTCATGTTAGAGATGGCTAATCTTCCTGAGGATTCGTTGCGCGAATATGATCACATAGAGTTCTTTTACTTGGATACAGTTAAAAATGTAGACAAAAATAGAGATTTTGGAGGAAAGGAGCATGGAGACGATCAATCCGCGATACTAAGCCGTAACAACAAACAACTAACACAGATAGTTCAAGAAACTTCCTTTAGAGAGTTTGAGTTCCATCAATATCTATTCGCCTGTCAAGCTAAGTTATTGTTTGATCTACACCGTCCGTTTGATGTTGCATCAAGAGGGTTCTCATTTATAGTCAGTTTCTCAGAAACTTTGGCCCGGCACGAGAGTAATTTGCCTTTCTGCTTGAGGGAAGTTTGGGTCCTAACTTCATGTTTGAGCTTGATCAACGCGACCGCTGACCATTATAGAGACGGACAAATAGCACCGGATGTAGAAAGAGAATATTATCGCATACGGGCTGAGTTATATACTTTATCCCGAATAAAGATCATGCGGCTTGCATACCTTATCGGGTTCGGATCAGATATAGAAAGAAGTCCACTTAACAGTGCTTCACTTAGCATGTTGCCATGGCCTATGCCTGCAGAATGGCCTTCACTTCCCTCTGATGCTTCATCTGAGGTTCTTGAAAAAGAAAAGTTAATTCTTCAAGTTACTCCAAGAGCCAAGCACTTTGGTATTCAAAGTAAACAGTTGTCTCTTGAACCGTGTCCTCTTTTGAAAACCGAGAGCTCGGTTGATACCAAGAAACTTGCGGAAATTTTTGTGGCTGCTGAACACGCTCTTCGTGCGACTATTACCGATCCTGATTTATGGAAATGTTTATCATCTTTAGAGGAGTTCGAGAAAAAATACCTGGACTTATCAAAGGGGGCTGCTGATAACTTTTACCATGCATGGTGGAAAAGACATGGAGTCGTTTTCGACGGTGAAATCGCGTCCGTTTACTTCAAACACAAGAACTATGAACAGGCTGCAAGTTCATACGAAAAAGTGTGTGCTCTGTATGCTGGTGACGGGTGGCAAGATTTGTTAGCAGACGTGCTTCCAAATCTAGCCGAATGCCAGAAAATATTAAATGATAAGCCTGGTTACTTATCTTCATGTGTGAGATTACTTTCTTTAGATAAAAACTTGTTCTCGGTCAAAGAACGCCAAGTGTTCCAGTCAGAGTTAGTTAGTCTTACACAAACTGAAATGGTTGACCCGAACCCGTTAGATGTGTCATCATTGATAACATATTCGGCTGACACCGGCCCACCAATGGAGCTGTGTGATGGGGATCCGGGAACTTTGACTTTGACTTTATGCAGTGAGTTTCCTGATGATATTACTCTTGAATCACTTAGTCTTACATTGACATCGACACATAATGCGGATGAACGTGTTAAGGCGATTAAGAGCAGTGGTGTGACAGTATTGAATACGGGTCGGAATACGATTGCCCTTACGTTGCCTGCGCAGAAACCGGGATCGTATGTGTTGGGTGTTCTTACAGGACAGATTGGTCATATAAGATTCAGGTCTCATGGTTTCTCGAAAGGTGGGCCCGCGCATAGTGGTGATATCGGTTTTGATAAGCCCGTTAAGCCTATATTGACGGTATTAATCCTGCTTTTATGGGTCAAAATGGTGTTCAAACCAAGATCCCTTGTGGACCTATATCCCGCAGTCTCGTCCGCATTATTAATAAACAAGCCTCAATGGGTCGGGATCGTTATCAAGCCATTAAACTACTCCCTCAAGGGAGCCCGTTTACACATTGACGTGGGGCCGTCATTAAAGATCGAGGAATCACGCGCCATTGAAATCGAGAAACGTGTCGATAACGATAATAACATTTGTCAACTTAATCTTACAAATGGATGTATAGAGTTACCAGACTGGGCCAGCAATATAACTACCATTTTATGGATTCCAGTTTGTGCCATTAGTGATGGACTGCCAAAAGGAAAATCAGCAGGTGTATTTTCAACCCAAAGACCAAACATTGCTAATGGGCTGAGGACTTTAGCTCTAAAACTTGAATTTGGAGTGTCACATAATCAAATATTGAAAAGGACTATACCAGTTCTTTTCAACGACCCGTTCCACGTCAGCACACAAGTCACCGACCAAGGCAGTGACGGGTCTTTGTTTTTGCAGGTGATATTACAGTCACAAGTGAAGGCTACATTAACTATACATGATGTTTCATTGGATTTACAAGACGGTTTTTCTCACGCTGGACGAGGTGATGGGAGACCGACATCTGGCATGTTCCCGTTGGTCGTTCCTCCGACATCTAAATCCGGAATATTGTTTGGTATATCACTTGAAGCTACAACTAATGAAGGCAATGAAGATGACGAGGTAGTGGTGCATCGTGATACAATAATAAATATAAAATATGAAATTAGCGGGGATAGATATCATGGATCTCACACCCCTCTATCTCTAAAACCCGAAGGACCCGAAAAGGATGACACGATTTTAACATTCAAAAGTGGTCTCACTTTACAACGGCCCGTGCAAGAGCCGTTATTAGCAGTCGCTTTTCTTCCTTTACCTTCGAACGGTCTTACAGTTGGTCAACTTGTCACATTCAAATGGAGAGTTGAAAGGTTGACCAGTTTTGACTTAAAGGACGAGTTATTATATGAAGTCAATGCGAACTCCAAGAATTGGATGTTTGCCGGAAGGAAGCGAGGCCATGCCCCTCTCTCCTCAAAACAAGGTGCAAGAATTGAGATATCAATAATGTGTGTGCCATTAGCTGCTGGGCATGTAAGACCACCACAACTCCACTTGCCAAATGTCAACCGGGCCCACATATGTTGCAACCCGGCGGGCCCACATTTAGTGTGTGTCTTGCCTCCACCTTTGAGCTCATCATTTTGCATTCCACATTGA | 3567 | 42.95 | MANLLAQLQSIKISCDGLTIAVKDVSDLWPLVKDKFDERLPFQRATLHNKNRYPVTVENLQAEFLLTTDSRIKSRVPQDQLYFCFQEPYATVVLVACEDLDEFKTVLKPRLKLILQNEEEWFIVFVSKAKSDKDPVSKMEKKVYARLEVDFNSRRRDRCCKFDLFDSEEPFWEDFELKTMECIRNTLDRRVQFYEDEIRKHNEQRLSPTWSFCDFFILKECLAFMLEMANLPEDSLREYDHIEFFYLDTVKNVDKNRDFGGKEHGDDQSAILSRNNKQLTQIVQETSFREFEFHQYLFACQAKLLFDLHRPFDVASRGFSFIVSFSETLARHESNLPFCLREVWVLTSCLSLINATADHYRDGQIAPDVEREYYRIRAELYTLSRIKIMRLAYLIGFGSDIERSPLNSASLSMLPWPMPAEWPSLPSDASSEVLEKEKLILQVTPRAKHFGIQSKQLSLEPCPLLKTESSVDTKKLAEIFVAAEHALRATITDPDLWKCLSSLEEFEKKYLDLSKGAADNFYHAWWKRHGVVFDGEIASVYFKHKNYEQAASSYEKVCALYAGDGWQDLLADVLPNLAECQKILNDKPGYLSSCVRLLSLDKNLFSVKERQVFQSELVSLTQTEMVDPNPLDVSSLITYSADTGPPMELCDGDPGTLTLTLCSEFPDDITLESLSLTLTSTHNADERVKAIKSSGVTVLNTGRNTIALTLPAQKPGSYVLGVLTGQIGHIRFRSHGFSKGGPAHSGDIGFDKPVKPILTVLILLLWVKMVFKPRSLVDLYPAVSSALLINKPQWVGIVIKPLNYSLKGARLHIDVGPSLKIEESRAIEIEKRVDNDNNICQLNLTNGCIELPDWASNITTILWIPVCAISDGLPKGKSAGVFSTQRPNIANGLRTLALKLEFGVSHNQILKRTIPVLFNDPFHVSTQVTDQGSDGSLFLQVILQSQVKATLTIHDVSLDLQDGFSHAGRGDGRPTSGMFPLVVPPTSKSGILFGISLEATTNEGNEDDEVVVHRDTIINIKYEISGDRYHGSHTPLSLKPEGPEKDDTILTFKSGLTLQRPVQEPLLAVAFLPLPSNGLTVGQLVTFKWRVERLTSFDLKDELLYEVNANSKNWMFAGRKRGHAPLSSKQGARIEISIMCVPLAAGHVRPPQLHLPNVNRAHICCNPAGPHLVCVLPPPLSSSFCIPH | 1188 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02662 | 1188 | PANTHER | EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 | 9 | 1187 | IPR045126 | GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(InterPro)|GO:1990071(PANTHER) | |
| Bial16g02662 | 1188 | Pfam | Trafficking protein particle complex subunit 10, TRAPPC10 | 1088 | 1156 | IPR022233 | - | |
| Bial16g02662 | 1188 | SUPERFAMILY | TPR-like | 537 | 615 | IPR011990 | GO:0005515(InterPro) | |
| Bial16g02662 | 1188 | Coils | Coil | 184 | 204 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02662 | K20307 | trafficking protein particle complex subunit 10 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189297 | Bial4g03262 | Bial16g02662 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr15:53755333 | Bial16g02662 | Bial-Chr16:68955920 | transposed | |
| Bial | Bial-Chr15:53758729 | Bial16g02662 | Bial-Chr16:68955920 | transposed | |
| Bial | Bial-Chr15:60143313 | Bial16g02662 | Bial-Chr16:68955920 | transposed | |
| Bial | Bial-Chr16:68955920 | Bial4g03262 | Bial-Chr4:74785566 | wgd |