AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02670 ATGGCAAATCGCTTGTTAGCACATGAAGTATCCGACCTTTGCCTCGGCAAGCCACCACTCACCTCCGTACCTATCTCCGCCACCATCCATCACGCCTTAACTGCCCTTAAATCCTCCAACGACACCCACATCAGCATCTGGACTTGCGACCACTCAGCGACCGAAAACTGCCGTTGCGTTGGTAAAATCTGCATGGTTGATATTATTTGTTACCTATGCAAACAAGACAACATATTATCACCTTACAACGCGCTTAAAGCGCCTGTTTCGGTCTTGTTGTCGCGTGTTCAGGCCGAGGTTGTTCAGCATGTGGAACCCTCGTATAGTTTGCTTGATGCAATTGATCTTATCATCAATGGAGCTCAGAATCTTGTGGTGCCAATAAAGAACACAACTTCCAAAAGAAAACAACTCCGGCAGCTACCGTCAATAGCTCCGACGACTCACGCCGGCGGCCGTGAATTTTGTTGGTTGACACAAGAAGATGTGATGAGGTTTCTTCTAAGTTCAATCGGATTATTCTCTCCGACCGCCGCATATTCCATCGAGTCACTCGGAATCATCACGACGGATATTCTCACAGTAAATTACCATTCCCCGGCGTCGAAAGCGCTCGACGCCATTTCCACCTCTCTCGCCGACCAGACGTCCGTCGTAGTCATTGACGACGGCGGGGTTTTGATCGGCGAAATCTCACCGTTCACTTTGAACTATTGCGACGAAATGGTCGCAGCCGCAATCACAACGTTATCATCTGGTGACCTCCTGGCTTACATAGACTGTGGGGGGCCACCAGAGGATATTACTAGGATTGTGGAATCTAGGTTAAGAGAGAGGAATCTGCACGGAATGTTGGATGAGTTTTTGACTTACTCATCTGGGATTCCGTACTGTAATTCCAGCTCTTCTTCTTCTGATGAAGAAAATGTTCTGTCACCTAGTACTGCCCGGTCTGGGCGGTACAAACGGTCAGACAGCTACTCTGCAAGGGTAATGAGGAGGTCAGAGGCGATTGTTTGCCATCCTGGAAGCTCGTTGGTGGCAGTGATGATTCAGGCGATCGCGATGCGAGTGAGTTATGTGTGGGTGATTGAAGAGGATTGTAGTGTGGTTGGGATTGTGAAGTTTTCCAGCATGTTGAAAGTTTTTCAAGAACATTTGGAGAGCATGATTTACTAG 1179 48.18 MANRLLAHEVSDLCLGKPPLTSVPISATIHHALTALKSSNDTHISIWTCDHSATENCRCVGKICMVDIICYLCKQDNILSPYNALKAPVSVLLSRVQAEVVQHVEPSYSLLDAIDLIINGAQNLVVPIKNTTSKRKQLRQLPSIAPTTHAGGREFCWLTQEDVMRFLLSSIGLFSPTAAYSIESLGIITTDILTVNYHSPASKALDAISTSLADQTSVVVIDDGGVLIGEISPFTLNYCDEMVAAAITTLSSGDLLAYIDCGGPPEDITRIVESRLRERNLHGMLDEFLTYSSGIPYCNSSSSSSDEENVLSPSTARSGRYKRSDSYSARVMRRSEAIVCHPGSSLVAVMIQAIAMRVSYVWVIEEDCSVVGIVKFSSMLKVFQEHLESMIY 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02670 392 SUPERFAMILY CBS-domain pair 180 388 IPR046342 -
Bial16g02670 392 SUPERFAMILY CBS-domain pair 5 168 IPR046342 -
Bial16g02670 392 MobiDBLite consensus disorder prediction 300 320 - -
Bial16g02670 392 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 18 386 IPR050511 GO:0005634(PANTHER)|GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02670 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189300 Bial4g03269 Bial16g02670
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:1442627 Bial16g02670 Bial-Chr16:69259518 dispersed
Bial Bial-Chr16:69259518 Bial20g02534 Bial-Chr20:67676577 dispersed
Bial Bial-Chr16:69259518 Bial4g03269 Bial-Chr4:75115560 wgd