AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02685 | ATGGATTCAGGGGTATTAGATGCTGATAGAATAAGCAAAGAGAAGAGTAAGTGGGGTGAAGGTAATAATAATAAAGTTTACACCCGACGCCCGAAAACCGCTGCCGTTGTTACCGACACCGTAAATAACGACCGAACCGTCACCGTAAATAACGACCGAACCGTAGTTGTAGAACCGGGACCAGGACCGTCCGATAATGATAATAATAATGAGGTGGAAAAGGCGGTGGTTACGTTGGTGGATGGACGGGTGAGGATTAATATAAAGGCTGCGAAGACGAAGGGTGAGATTGGTGAGCTTAAAGAAACGATGAAAACCGAGCTGGAACGGGTGAGGCGGTTAGCTCAACGGGTCGAGGATAAGGAAGCGGAGTTAACTGCTTTTTCGACGGAAGTTGTTACGGACGGTTTGGGTGGTTTGGGTTACAACGGTTCGCGGTATTCAGGTAATGATATGGTTGATAGACGAGCTTTACTTAGAGTTAATTCGGAAATGGGTGCGAGTTATACGAATAGCGGGATAAGGCCTTTTAGACAGTTGAGTGTTTCGGTTATGAATAATAATAATAATCATCATTATCATCATCATGGTCATGGAGTTGGTGAGTATTTGGAGAAGGAGAAGAGGACACCGAAGGCGAATCAGTATTATCGGAATTCGGATTTTCTTCTCGGGAAAGACCGGTTACCGCCTGAAACGAACAAGAGGCGTAAGACGAATAGTGGAAGAAAGGCTAAAGTGTCGAGTAATATGTTCAAGAATTGTAGCAATTTGTTGCAGAGGTTAATGAAGCATAAACACGGGTGGGTGTTTAACGAACCCGTCAACGCGCAACAGTTAGGGCTTCATGATTACCATGATATTATTAAGCATCCGATGGATTTGGGCACGATTAAGAGCCGGCTTGCGCAGAACTTTTACAAGTCTGCGATGGAGTTTGCAGAGGACGTGAGACTCACGTTTCGTAACGCGATGACGTATAATCCGAGAGGGCAAGATGTGCATGTGATGGCGGAGGTGTTATCGGAGATATTTGAAGAACGGTGGGCGTTGATTGAAGCACAAACGAATCAAGATTTGAGATACGGGATGATTTATGACGCGAACACACCGACTCCAACGTCAAGAAAGGTTCCGCATTTTGCGCACACGCCTGCGAGAATGCTGTACCGGTCAGAGTCTTTGAACTTGCCTGTGCTGACGAGGCCAACGCCTGCACCAGCTGTCAGGACACCTGTACCGAAGAAGCCGAAAGCTAGGGACCCGAATAAGAGGAACATGACGTATGAAGAGAAGCAGAAACTTAGTACAAATCTTCAAAGTTTGCCTTCAGAAAAGCTTGATAGTATCGTGCAGATTATTAAGAAGAACACTTCGCTTTCTCAACAAGATGGTGAAATTGAAGTTGATATCGATAGTGTCGATATTGAAACGCTTTGGGAACTCGATCGGTTTGTCATGAATTATAGGAAGAATTTGAGTAAGCATAAAAGGAAAGCTGCACTTGCTGAACAAGCGAGGGTAGAAGCCGGTGACGTTAATCAGGCCGTGAATCCATCAACGTCCATACCGGAGGCCTTGAAAGAAAATAAAACGAATGAAACAAATCGTCCGATCACACCGCCGAATGGCAGTAGTTCAAGCAGTTCTAGCAGTGATTCTGGATCTTCTTCAAGCGATTCAGATAGTGATAGTTCATCTGAAGATGGATCAGACGCGGGTCGTTCACCTAGAACCTGA | 1740 | 45.23 | MDSGVLDADRISKEKSKWGEGNNNKVYTRRPKTAAVVTDTVNNDRTVTVNNDRTVVVEPGPGPSDNDNNNEVEKAVVTLVDGRVRINIKAAKTKGEIGELKETMKTELERVRRLAQRVEDKEAELTAFSTEVVTDGLGGLGYNGSRYSGNDMVDRRALLRVNSEMGASYTNSGIRPFRQLSVSVMNNNNNHHYHHHGHGVGEYLEKEKRTPKANQYYRNSDFLLGKDRLPPETNKRRKTNSGRKAKVSSNMFKNCSNLLQRLMKHKHGWVFNEPVNAQQLGLHDYHDIIKHPMDLGTIKSRLAQNFYKSAMEFAEDVRLTFRNAMTYNPRGQDVHVMAEVLSEIFEERWALIEAQTNQDLRYGMIYDANTPTPTSRKVPHFAHTPARMLYRSESLNLPVLTRPTPAPAVRTPVPKKPKARDPNKRNMTYEEKQKLSTNLQSLPSEKLDSIVQIIKKNTSLSQQDGEIEVDIDSVDIETLWELDRFVMNYRKNLSKHKRKAALAEQARVEAGDVNQAVNPSTSIPEALKENKTNETNRPITPPNGSSSSSSSSDSGSSSSDSDSDSSSEDGSDAGRSPRT | 579 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02685 | 579 | MobiDBLite | consensus disorder prediction | 400 | 423 | - | - | |
| Bial16g02685 | 579 | CDD | Bromo-plant1 | 251 | 349 | IPR037377 | - | |
| Bial16g02685 | 579 | Pfam | Bromodomain extra-terminal - transcription regulation | 427 | 487 | IPR027353 | - | |
| Bial16g02685 | 579 | Gene3D | - | 420 | 500 | IPR038336 | - | |
| Bial16g02685 | 579 | PANTHER | OSJNBA0053K19.4 PROTEIN | 22 | 571 | - | - | |
| Bial16g02685 | 579 | Gene3D | - | 187 | 362 | IPR036427 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | SMART | bromo-6 | 248 | 354 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | Coils | Coil | 97 | 131 | - | - | |
| Bial16g02685 | 579 | MobiDBLite | consensus disorder prediction | 514 | 564 | - | - | |
| Bial16g02685 | 579 | SUPERFAMILY | Bromodomain | 231 | 355 | IPR036427 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Bial16g02685 | 579 | MobiDBLite | consensus disorder prediction | 513 | 579 | - | - | |
| Bial16g02685 | 579 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Bial16g02685 | 579 | Pfam | Bromodomain | 255 | 339 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | ProSiteProfiles | Bromodomain profile. | 263 | 335 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | PRINTS | Bromodomain signature | 298 | 316 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | PRINTS | Bromodomain signature | 266 | 279 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | PRINTS | Bromodomain signature | 316 | 335 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | PRINTS | Bromodomain signature | 282 | 298 | IPR001487 | GO:0005515(InterPro) | |
| Bial16g02685 | 579 | MobiDBLite | consensus disorder prediction | 227 | 246 | - | - | |
| Bial16g02685 | 579 | Coils | Coil | 486 | 506 | - | - | |
| Bial16g02685 | 579 | ProSiteProfiles | NET domain profile. | 417 | 497 | IPR027353 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02685 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:69492006 | Bial3g01752 | Bial-Chr3:60423851 | dispersed | |
| Bial | Bial-Chr12:53703004 | Bial16g02685 | Bial-Chr16:69492006 | wgd | |
| Bial | Bial-Chr16:69492006 | Bial24g02200 | Bial-Chr24:52574901 | wgd | |
| Bial | Bial-Chr16:69492006 | Bial4g03316 | Bial-Chr4:75821103 | wgd |