AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02725 ATGGGCACGGTTCGGTCCGAATCCCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGGAACCCGGTTCGTGAAAACGCTACGTTAACATTCGGTACAGACGGAAACCTGGTCCTGGCTGATGCTGACGGACGCGTTGTCTGGCAAACGAACACCGCCAACAAGGGTGTGGTCGGTTTTCAATTGCTTCCAACTGGTAACATGGTTCTTCATGACGGTAAGGGTAATTACTTATGGCAAAGCTTTGATTCCCCAACCGATACTTTCTTGGTCGGTCAAACACTCCGAGCCAATGGTCCGAATAAGCTCGTGAGTCGGCTTTCAGAGGCGAGTAATGTGGATGGACCGTATAGTTTGGTCATGGAGCCAAAAGGGTTATCCTTGTATTACAAAAGTCCTAACTCGCCTCGACCAATGCTTTACTGGACGTCTAGCGAGTGGTTCACCGTTGACCAAGAAGGTGAGTGTCAATTACCGGGACGATGTGGGAACTTTGGGTTATGTGAGGACAGTCAGTGTGTGGCGTGCCCGACACCAAATGGGTTAAGTGGTTGGAGCAAAGATTGTGATTTGAAAAAGGTGACGTCTTGCAAAGCGAGTGAGTTTGGGTACTACAAGCTTCAAGGGGTTGACCATTTTATGATCAAGTACACGAGGGGAGATGGTGTGACGAAACAAAGCGATTGCGAGAGCAAATGCACGAAGGATTGCAAGTGCATGGGGTACTTCTATCACACGGAGGGTTCGAGGTGTTGGATTGCTTATGATTTGAAAACATTGACAAGAGTTGGGAACTCGACTCATTTGGCGTACATCAAAACACCCAACAAGTAA 831 48.5 MGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRVVWQTNTANKGVVGFQLLPTGNMVLHDGKGNYLWQSFDSPTDTFLVGQTLRANGPNKLVSRLSEASNVDGPYSLVMEPKGLSLYYKSPNSPRPMLYWTSSEWFTVDQEGECQLPGRCGNFGLCEDSQCVACPTPNGLSGWSKDCDLKKVTSCKASEFGYYKLQGVDHFMIKYTRGDGVTKQSDCESKCTKDCKCMGYFYHTEGSRCWIAYDLKTLTRVGNSTHLAYIKTPNK 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02725 276 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 144 274 IPR051343 -
Bial16g02725 276 CDD PAN-AP-plant 195 274 - -
Bial16g02725 276 CDD B-lectin 1 84 IPR001480 -
Bial16g02725 276 Gene3D - 14 144 IPR036426 -
Bial16g02725 276 SMART blect-4 1 84 IPR001480 -
Bial16g02725 276 Pfam D-mannose binding lectin 13 101 IPR001480 -
Bial16g02725 276 SUPERFAMILY alpha-D-mannose-specific plant lectins 8 146 IPR036426 -
Bial16g02725 276 ProSiteProfiles Bulb-type lectin domain profile. 1 82 IPR001480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02725 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:70133009 Bial16g02729 Bial-Chr16:70170211 dispersed
Bial Bial-Chr16:70098476 Bial16g02725 Bial-Chr16:70133009 tandem
Bial Bial-Chr16:70133009 Bial16g02726 Bial-Chr16:70145616 tandem