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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02727 ATGCTTTATTGGACGTCTAGCGAGTGGTTCCCCGTTGACCAAGGTAGTTTGGTCAACTTAACTCTTACGTCAGTCCCAGACACTGACGAGGGTTTTCTATATTACTTAGCGTTCGATTATTTCACCACAAAGTCATCTTCAAACCGCAACATGGCGTTTACAAGATACAACAACACATTATCTTATCTTCGGTTAGGGATAGACGAAAACCTTAGGTTTTACACGTATAACCCTAATGTGCAAGGTGTGGCATGGGAGTTGGTGTACACGTTTCTTGATAGGGATTCGACTGAAGGCGAGTGTCAATTACCGGGAAGATGTGGGAACTTTGGGTTATGTGAGGACAGTCAGTGTGTGGCGTGCCCGACACCAAATGGGTTAAGTGGTTGGAGCAAAGATTGTGAAGTGAAAAAGGTGACGTCTTGCAAAGCTAGTGACTTTGAGTACTACAAGCTTCAAGGGGTTGACCATTTTATGATCAAGTACACGAGGGGAGATGGTGCGACGAAACAAAGCGATTGTGAGAGCAAATGCACGAAGGATTGCAAGTGTATGGGGTACTTCTATCACACGGATGGTTCGAGGTGTTGGATTGCTTATGATTTGAAAACATTAACAAGAGTTGGGAACTCGACTCATTTGGCGTACATCAAAACACCAAACAAGTAG 669 44.1 MLYWTSSEWFPVDQGSLVNLTLTSVPDTDEGFLYYLAFDYFTTKSSSNRNMAFTRYNNTLSYLRLGIDENLRFYTYNPNVQGVAWELVYTFLDRDSTEGECQLPGRCGNFGLCEDSQCVACPTPNGLSGWSKDCEVKKVTSCKASDFEYYKLQGVDHFMIKYTRGDGATKQSDCESKCTKDCKCMGYFYHTDGSRCWIAYDLKTLTRVGNSTHLAYIKTPNK 222
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02727 222 CDD PAN-AP-plant 141 220 - -
Bial16g02727 222 ProSiteProfiles PAN-Apple domain profile. 142 220 IPR003609 -
Bial16g02727 222 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 29 220 IPR051343 -
Bial16g02727 222 Pfam S-locus glycoprotein domain 15 126 IPR000858 GO:0048544(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02727 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189316 Bial4g03342 Bial16g02727
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:70153241 Bial4g03344 Bial-Chr4:76299058 dispersed
Bial Bial-Chr16:70153241 Bial16g02728 Bial-Chr16:70163506 tandem