AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02729 | ATGGGCACGGTTCGATCCGAATCCCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGGAACCCGGTTCGTGAAAATGCCACCTTAACATTCGGTACAGACGGAAACCTAGTCCTGGCGGATGCTGACGGACGCGTTGTCTGGCAAACGAATACTGCCAACAAGGGTGTGGTCGGTTTTCAATTGCTTCCAACTGGTAACATGGTTCTTCATGACGATAAGGGTAATTACTTATGGCAAAGCTTTGATTCCCCAACCGATACTTTCTTGGTCGGTCAAACACTACGAGCAGGTGGTCCGAACAAGCTCGTGAGTCGGCTTTCTGAGGCGAGTAATGGGGATGGACCGTATAGTTTGGTCATGGAGCCAAAAGGGCTATCCTTGTATTACAAAAGTCCCAACTCGCCTCGACCAATGCTTTACTGGACGTCTAGCGAGTGGTTCACCGTTGACCAAGGTAGCTTGGTCAACTTAACTCTTACGTTAGTGCCAGACACTGACGAGGGTTTTCTGTATTACCTAACTTTTGATTATTTCACCACAAAGTCATCTTCAAACCGTAACATGGCGTTTACAAGATACAACAACACATTATCTTATCTTCGGTTAGGGATAGACGGAAACCTTAGATTCTACACGTATAACCCTAATGTGCAAGGTGTGGCATGGGAGTTAGTGTACACGTTTCTTGATCGGGATTCAATGGAAGGCGAGTGTCAATTACCAGGACGATGTGGGAACTTTGGGTTATGTGAGGATAGTCAGTGTGTGGCATGCCCGACACCAAATGGGTTAAGTGGTTGGAGCAAAGATTGTGATGTGAAAAAGGTGACGTCTTGCAAAGCGAGCGAGTTTGGGTACTACAAGCTTCAAGGGGTTGACCATTTTATGATCAAGTACACGAGGGGAGATGGTGCGACAAAACAAAGCGATTGCGAGAGCAAATGCACGAAGGATTGCAAGTGCATGGGGTACTTCTATCACACGGATGGCTCGAGGTGTTGGATTGCTTATGATCTGAAAACATTGACAAGAGTTGGGAACTCGACTCATTTGGCGTACATCAAAACACCCAACAAGTAG | 1080 | 46.85 | MGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRVVWQTNTANKGVVGFQLLPTGNMVLHDDKGNYLWQSFDSPTDTFLVGQTLRAGGPNKLVSRLSEASNGDGPYSLVMEPKGLSLYYKSPNSPRPMLYWTSSEWFTVDQGSLVNLTLTLVPDTDEGFLYYLTFDYFTTKSSSNRNMAFTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGNFGLCEDSQCVACPTPNGLSGWSKDCDVKKVTSCKASEFGYYKLQGVDHFMIKYTRGDGATKQSDCESKCTKDCKCMGYFYHTDGSRCWIAYDLKTLTRVGNSTHLAYIKTPNK | 359 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02729 | 359 | Gene3D | - | 12 | 131 | IPR036426 | - | |
| Bial16g02729 | 359 | CDD | B-lectin | 1 | 84 | IPR001480 | - | |
| Bial16g02729 | 359 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 82 | IPR001480 | - | |
| Bial16g02729 | 359 | SMART | blect-4 | 1 | 84 | IPR001480 | - | |
| Bial16g02729 | 359 | Pfam | PAN-like domain | 300 | 335 | IPR003609 | - | |
| Bial16g02729 | 359 | Pfam | S-locus glycoprotein domain | 152 | 263 | IPR000858 | GO:0048544(InterPro) | |
| Bial16g02729 | 359 | CDD | PAN-AP-plant | 278 | 357 | - | - | |
| Bial16g02729 | 359 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 11 | 357 | IPR051343 | - | |
| Bial16g02729 | 359 | Pfam | D-mannose binding lectin | 13 | 95 | IPR001480 | - | |
| Bial16g02729 | 359 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 8 | 146 | IPR036426 | - | |
| Bial16g02729 | 359 | FunFam | Os04g0303100 protein | 3 | 137 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02729 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189318 | Bial4g03344 | Bial16g02729 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:70098476 | Bial16g02729 | Bial-Chr16:70170211 | dispersed | |
| Bial | Bial-Chr16:70133009 | Bial16g02729 | Bial-Chr16:70170211 | dispersed | |
| Bial | Bial-Chr16:70145616 | Bial16g02729 | Bial-Chr16:70170211 | dispersed | |
| Bial | Bial-Chr16:70170211 | Bial4g03344 | Bial-Chr4:76299058 | dispersed | |
| Bial | Bial-Chr16:70170211 | Bial16g02731 | Bial-Chr16:70281321 | proximal | |
| Bial | Bial-Chr16:70163506 | Bial16g02729 | Bial-Chr16:70170211 | tandem |