AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02737 ATGGCTTCTCATCATTTCATTTCTGCTATACAATTTCTCTTCTATATTCACATACTTTCTACTTTCACCATATCTAGAGCTGCTGTTCCTTCTTCAGAAACATTCACATATGTTAATTCAGGCGAATTCGGTATATACATTGTAGAGTACGACGCAACATATCGCCCTCTTCCCACTGGTACCAGTCCATTCCAGATTTGCTTCTACAACACCACCCCTAACGCCTACACTCTAGCCTTGCGCATGGGCACTACAAGGTCCGAATCACTCAGGCGTTGGGTGTGGGAAGCTAACCGTGGCAACCCTGTCCACGAGAACGCGACTCTAACACTTAGAAAAGACGGAAATCTGGTCCTGGCAGACGTGGATGGTCGGATAGCCTGGCAAACGAATACAGCCAACAAGGGGGTCGTACATTTCGAGGTACTCCCAACAGGTAATATGGTTCTTCAAGATGCAAAAGGTAACTTCATATGGCAAAGTTTCGATTCTCCAACGGATACTCTCATGGTAGGTCAATCTCTCCGAGCTAGTGGCGTGAATAGGCTCGTGAGCCGGAGTTCAGAGACGAACAACGTCGATGGACCATATAGTTTGGTGATGGAGCCCAAAGGGCTAGCCATGTATTACAAGAGCCCTAACTCGCCCAAACCAATGCGATATTGGTCCTCTACTGAATGGTTCATAGTTGATAAGGGTAGTATGGTCAATTTAACACTTAATTCGAAACCAGATACGGATGCGGGCTATCTTTATTACTTATCTTTTGATTACTTCACCACACAACCCTTGTCCATCGAAGCTCGTAACATGGCTTACACAAAATATGATAATAGGTTATCGTTTCTTCGATTAGAAATAGATGGAAACCTTAGATTTTACACATATGACGACAATGTTGATGGTGGTGGTGTTGCTTGGGAATCAGTCTACACGTTTCTGGATAGGGATTCAATGGAAGGTGAGTGCCAATTACCTGAAAGATGCGGGAGATTTGGTTTGTGTGAGGATAACCAATGTGTTGCTTGCCCAACCGCGAACGGTCTAAGAGGTTGGAGCAAAGATTGTGAGGCAAAGAAGGTGATATCTTGCAAAGCTAATGAGTTTCACTACTACAAGCTTCAAGGGGTCGACCATTTCATGATCAAGTACACGAAGGGAGAGGGACCGATGAAACAAAGCGATTGCGAGAGAAAATGCACGAAGGATTGCAAGTGCATGGGGTATTTCTATCACACTGGTGAATTAAGGTGTTGGATTGCTTATGATTTGAAAACATTAACGCAAGTTGGGAACTCGACTCATTTGGCTTACATCAAAACATCCAACAAATAG 1335 43.97 MASHHFISAIQFLFYIHILSTFTISRAAVPSSETFTYVNSGEFGIYIVEYDATYRPLPTGTSPFQICFYNTTPNAYTLALRMGTTRSESLRRWVWEANRGNPVHENATLTLRKDGNLVLADVDGRIAWQTNTANKGVVHFEVLPTGNMVLQDAKGNFIWQSFDSPTDTLMVGQSLRASGVNRLVSRSSETNNVDGPYSLVMEPKGLAMYYKSPNSPKPMRYWSSTEWFIVDKGSMVNLTLNSKPDTDAGYLYYLSFDYFTTQPLSIEARNMAYTKYDNRLSFLRLEIDGNLRFYTYDDNVDGGGVAWESVYTFLDRDSMEGECQLPERCGRFGLCEDNQCVACPTANGLRGWSKDCEAKKVISCKANEFHYYKLQGVDHFMIKYTKGEGPMKQSDCERKCTKDCKCMGYFYHTGELRCWIAYDLKTLTQVGNSTHLAYIKTSNK 444
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02737 444 CDD PAN-AP-plant 362 442 - -
Bial16g02737 444 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 54 441 IPR051343 -
Bial16g02737 444 Pfam D-mannose binding lectin 94 179 IPR001480 -
Bial16g02737 444 CDD B-lectin 48 165 IPR001480 -
Bial16g02737 444 PIRSF SLG 2 444 IPR035446 -
Bial16g02737 444 Gene3D - 94 225 IPR036426 -
Bial16g02737 444 ProSiteProfiles Bulb-type lectin domain profile. 45 163 IPR001480 -
Bial16g02737 444 FunFam Os04g0303100 protein 84 218 - -
Bial16g02737 444 SMART blect-4 48 165 IPR001480 -
Bial16g02737 444 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 227 IPR036426 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02737 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189320 Bial4g03346 Bial16g02737
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:70348588 Bial4g03346 Bial-Chr4:76409747 dispersed
Bial Bial-Chr16:70281321 Bial16g02737 Bial-Chr16:70348588 proximal