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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02757 ATGAAAGAAGAAGAAATCGAACGGTTAAGAGGACTCATCAGAGACTGCGTCAGCAAACACTTATACTCGTCCGCTATATTCTTCGCGGACAAGGTCGCCGCGTTCACTTCCGAACCGGCGGACATTTACATGCAAGCACAGGCTCTCTTCCTCGGACGACATTGCCGCCGTGCTTTCCACCTCCTTAATGCTTCTCACATTGTCCTTCGTGATCTTCGGTTTCGTTACCTTGCCGCCAAATGCCTCGTTAAACTTGATGCACTTGATCAAAGCCGATATGGGCCTAGAAACCTGAAGGCTACCTTCATATCTTCAACCTGA 321 48.91 MKEEEIERLRGLIRDCVSKHLYSSAIFFADKVAAFTSEPADIYMQAQALFLGRHCRRAFHLLNASHIVLRDLRFRYLAAKCLVKLDALDQSRYGPRNLKATFISST 106
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02757 106 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 91 - -
Bial16g02757 106 PANTHER CELL DIVISION CYCLE 16,23,27 9 88 - GO:0005680(PANTHER)|GO:0005737(PANTHER)|GO:0016567(PANTHER)|GO:0031145(PANTHER)|GO:0045842(PANTHER)|GO:0051301(PANTHER)
Bial16g02757 106 Gene3D Tetratricopeptide repeat domain 4 98 IPR011990 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02757 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189332 Bial4g03361 Bial16g02757
363346 Bial12g02351 Bial16g02757
368939 Bial16g02757 Bial24g02209
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:70856518 Bial24g02209 Bial-Chr24:52668185 dispersed
Bial Bial-Chr16:70856518 Bial4g03361 Bial-Chr4:76781270 wgd