AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02808 ATGGGTGAAATGGATTTGGCCCTTCCGGGACACGTGGAACCGCAAGAAAAAGACTGGTTAGACGCGTCATATGTGTTCTATGACGAGAATAAGAATCTTGTACGCGTTTACAATAAAGATTGTGTTGACATAAGAAAGCTCAAGTATACTTTCATTGAAAACTCCAATGAAGTGTTCCCTTGGCGTAAGAGTCGACCCGCCCAACGTAACCCAAGCACTCAAGTTGAATCGACCGAAAAGATACCAACTGTGGATGAATTGAAGTTCCCGGTGAGTCTAGAGAAGATCGTGAAGGTTCGTGTGAAGAGGCCAGCCGTGAACAGGACGAAAGAGGACAAGAAGAAAAAGAACGAAGTTCTGCTGATAAATGATATAAAATTCGATTGCAACAAGTTTGTGAAGTTCGATGTGTTTGTAAATGACAAGGTTAGCACGGGCGGAAATATTCCCACGGCTTGTGATCCTGAATACGCGGGTTCTTTTGCACAGATTCCGCATAGTGATGTGAAGAAAGCGTCGATGAGGAGTGGAGCGAGGTTTGGGCTAAATCAGTTGTTGGATGACACGAATACGGAAGGTGAAGAGTATGCGACAGTGGTGTTGGTGCCAAAGACAGGGTTTGAGGATCTCAGCATAGGCGAAATCACAATCGAGTTGTTTCCTCGGCTTTTAGTATCTTGA 681 44.64 MGEMDLALPGHVEPQEKDWLDASYVFYDENKNLVRVYNKDCVDIRKLKYTFIENSNEVFPWRKSRPAQRNPSTQVESTEKIPTVDELKFPVSLEKIVKVRVKRPAVNRTKEDKKKKNEVLLINDIKFDCNKFVKFDVFVNDKVSTGGNIPTACDPEYAGSFAQIPHSDVKKASMRSGARFGLNQLLDDTNTEGEEYATVVLVPKTGFEDLSIGEITIELFPRLLVS 226
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02808 226 PANTHER POLYPHENOL OXIDASE C, CHLOROPLASTIC-LIKE 53 219 - -
Bial16g02808 226 Pfam Protein of unknown function (DUF-B2219) 89 219 IPR022740 GO:0004097(InterPro)
Bial16g02808 226 Pfam Polyphenol oxidase middle domain 15 66 IPR022739 GO:0004097(InterPro)
Bial16g02808 226 Gene3D - 4 57 IPR008922 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02808 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
26364 Bial15g01639 Bial16g02808
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:72049162 Bial18g01192 Bial-Chr18:19877970 dispersed
Bial Bial-Chr15:59558795 Bial16g02808 Bial-Chr16:72049162 wgd