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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02811 ATGGGTAATAAGCTGGGCCGGAGGAGACAATTGGTGGATGAGAAGTATACGCGGCCGCAAGGGTTGTATCAGCATAAAGATGTGGATCATAAGAAGCTCAGGAAGCTGATTCTTGACTCGAAGTTGGCGCCGTGTTATCCTGGAGATGATGAGTGTGGGTGTGATCTGGAAGAGTGTCCGATTTGTTTTCTGGAAGAACAAAGAGTGATAGAAGCAAAAATAAGAATGAGACGACAAGAAATTCAAGATGAAGAGGAAAGAATGTTAAAAAGGCAAGAAACGGGTGGTTCTTCAAACAGGGTCGTTGAATCAACGGAGACTGAATATTATTCTAGAGGAGCAACCTCTTCTTCTGAAGGTGAGGAAATTGTTTCCGCTTCAAATAATGCAACTATTAGACATCCTCCACGTCATAGGGAGAACAGCAGTCTTACTCTTGTTTCTTTATAG 450 42.67 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDECGCDLEECPICFLEEQRVIEAKIRMRRQEIQDEEERMLKRQETGGSSNRVVESTETEYYSRGATSSSEGEEIVSASNNATIRHPPRHRENSSLTLVSL 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02811 149 MobiDBLite consensus disorder prediction 85 149 - -
Bial16g02811 149 PANTHER PROTEIN SIP5 65 127 IPR039301 GO:0005737(PANTHER)
Bial16g02811 149 MobiDBLite consensus disorder prediction 94 132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02811 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
28256 Bial16g02811 Bial3g03135
189349 Bial4g03414 Bial16g02811
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:72161834 Bial3g03096 Bial-Chr3:75403296 dispersed
Bial Bial-Chr16:72161834 Bial4g03414 Bial-Chr4:77872381 wgd