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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02819 ATGTGTCGCCTGCGCGATTGCAGTGTATGCGAGTGTCCAGAACATGAATTCCCGGAACTGTTTAAAAAGCCATCACTGCATATTCTTCCAAAAGATGACCCTGTATGTCAAGAGGGAAAACCCGAGGCTACTGTTGACCGAACACTAGATGCTAAATCATTTAGAGGCTGGGTAGAAGTTGATAATCCGTGGACTCATGAAGATGAAACTGATATTGGCGAAATGACATATGTTAATCTGCAACTGAATCCCGAACGTCATACAGGGTATACAGGGCCATCAGCGAGACGACTATGGGATGCTATATACTCAGAATATTATGCATATGGAGAGACGTGCCCCGAGAAGAAAGTACTATACAAACTAATATCTGGTCTACACACTTCAATTTCAAGTCATATAGCTGCTGATTATCTTCTTGATGAGGCTACCAATAAGGCAGCTGCTTATTTGGATCAAGCTGAGTATGACTCTGGTAACCATGTGGAGGATTCGAGAGCTCAATTCTTGATTCGACAACTCGTTCACGATTCGAAATTGCAAGATGCGTGTGCTCTTCCGTTTAATGAGGCTGAACTGTGGCAAGGCCAAGGTGGGCCCATGCTCAGGCAGCAAATTCAAAATCAGTTTCGAAACATCAGGTTTTTATTTTCTGAATTCTAA 663 42.99 MCRLRDCSVCECPEHEFPELFKKPSLHILPKDDPVCQEGKPEATVDRTLDAKSFRGWVEVDNPWTHEDETDIGEMTYVNLQLNPERHTGYTGPSARRLWDAIYSEYYAYGETCPEKKVLYKLISGLHTSISSHIAADYLLDEATNKAAAYLDQAEYDSGNHVEDSRAQFLIRQLVHDSKLQDACALPFNEAELWQGQGGPMLRQQIQNQFRNIRFLFSEF 220
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02819 220 PANTHER ERO1-RELATED 143 214 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(PANTHER)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro)
Bial16g02819 220 SUPERFAMILY ERO1-like 1 216 IPR037192 -
Bial16g02819 220 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 1 142 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Bial16g02819 220 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 141 214 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02819 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189356 Bial4g03423 Bial16g02819
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:72334378 Bial1g02393 Bial-Chr1:40234358 dispersed
Bial Bial-Chr16:72334378 Bial4g03423 Bial-Chr4:78050995 wgd