AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02823 ATGAGAGAAGAAGGTATCAGTTCATCTGGTGACCCGTTACTTTTCCCCAATTCACCTCCTCCAACTGCTGCTGCAAGCTCTGCCGGAGCATCATCACCAGCTGTAGCCACCAATGCTGGCAGTGCAGATTGGTTGGGTCACGGTCAGGGGTCCAAAGCGGGTTCACTGTCCAGAATCAGTTCACAACCCGTGTGGATCTCACTGAGTACAAGTGCTGGTGGCTCAGCTCTCGGTTCATCCAAACCTTCATGTAGACCATGGGAAAGGGGTGATCTTCTAAGACGGTTATCCACTTTCAGCCCTGCAAACTGGTTTGGAAAACCAAAGGCTGCTAGTTCACTTTCTTGTGCTAGAAGAGGTTGGGTGAATTTAGATGTTGATAAGATTCAATGCGAGTCGTGTGGGGAGAATCTGAAATATAACGGACAAGATTCATGGGCTCGTACAGAAGGTGAAAATGATGAAGAGTTTGCTAATTTGCTGGATGAAGGACATAACGCCACGTGCCCTTGGAGAGGAAACAGCTGCGCTGAGAGTCTGGTTCAGTTCCCTCCGACCCCACCATCTGCTCTGATTGGCGGTTACAAGGACCGTTGTGATGGGCTAATTCAGTTTCCTTATTTACCCGTAGTGGCTAACTCGGCTATTGATCAGATGAAGCTTTCTAGAAGTCTAGAAATTGACCGGTTTTTAGTCCAGTCAACTGTTTATCCGGGAGATGTTATGTCTGATTCAGAAATAAGCATATATCTACGTGCCCAGAAGTTGATCAGCTTATGTGGATGGGAGCCTAGGTGGCTTCCAAATGTTCAAGATTGTGAAGAGCATTCGGCTCAATCTGCTAGAAACGGTGGTTCGTTCAGTCCTAAAAAAGATCAAGACCCGTTTCAAGGCCCGAGCAAGAAACGTGTTACTAACTCAACCAAAAAAGGATCTCGGGTCAAGTCAAAGTTTGACTCCGGATCGCTTCTCTTGGATTGCAGCTTATGTGGCGCAACAGTGAGAATCTTGGACTTTGTTCGGGTCAACCTTCCTGCTCGTCTTGCTCCTAACAACATCGATGTTCCTGACACGAGTAAAAAGATGGCGGTTACTCGTGGAGCAAGTGCCGCTAGTGCCATTAGCGGCTGGGTGGCGGCTGACGGGGCAGAAGACGAACAGACCGAAGACGTTGGCGAGGCGGCGGTTTCAAACGTTCGGATGGATCTAAATCTCACCATGGGAAGCGGTCTATCTACAGGACACGGGACAAAACGACCGATATCTGAGTTATATCAAGACGGGAATTTAGGTCGGGATCTAGTCATCGGACAACCAGCTGGCAGTGAGGTCGGTGACCGTGCAGCATCGTATGAATCCCGTGGGCCCACTTTTAAACGAAACATTGACGAAGGTGGGTCCACTGTTGACAGACCACACGAGCTCATTCGCCAGGCGGACAGTGTCGAGGGCGTTGTCATTGACCGTGACGGTGATGAAATCAATGACAGTAAAACGTCCACGGGTCCATCTAAACGGGCCTGTGAGTCATCATCCGGTGCAGGCCCAAGTCAGACTTTGTATTTTGACATTGGTCAACCGGGCCCGTCGAGTCAAGGTTACGAACACGCAGCACACGCGTCTTCAGTCATCGCAATGGATACGATTTGCCATAGTGAAGATAATGATTCGATGGAGAGTGTGGAAAACCATCCGGGTTTTAATGATGAGGTCAACTACCCGTCCACGTCAGCAGTCAACCATGACCTGAATGAAACTTCCGACATGAACCATAGCACCCAGGGTCAACAAAGCACGTCGGTTTGGGTCAACAGTGAAATAGGCGTAAGCAGCACTAACTATGAAGAAGTGGTGAATACTGATGCCGCTAGGCGGGAAGGACCAAGCCTGGCGATTAGTGGCGGGAGTGTTGGAATGGCTGCGAGTCATGAGGCTGAGATTCATGGTTTGATTCATAGAACTGAAAGTGTTGTTGGTGACATGGAACCGGTTACTGGTGTGACTGAGAATCAGGGTCAAACGGGTGAGTTTGTTCCGGAAGAAATGCAACAAGAATATTCTGGAAGGGGAGATAGTGGGTCAAAGGTTGTTGGGTCGGTTAAAGGTGAATCGGTTGAGAGTGGTGAGAAGACCAGTGATTTGAATCTTTTGCCTCATGAGCAAAACTCACACCCGTCTCTTTCGTGCAATGCGGTTGTGTATTCGGGCCTTGAATTGTCAAAAGATGAAGTTATGCAGGCCCGTAAGTCGTCTCCTAATGAAGAATGTGGGTACCCGAGTTACCCACCTGCAACCGAATTAGGGCCGCCAAATGGAGAAAGCAAATATGAAGAACCTGTTGAATTTGATCCAATCAGGCATCATAACTTCTTCTGCCCTTGGGTTAATGGTAACGTTGCTGCAGCTGGGGTCGTTGAACATAATAATGGTGCTAGTTCAAGTTCCAGTTCTAGTGCATTAGCCCTTTGTGGCTGGCAGTTAACTTTAGATGCTCTAGATGGCTTTCAAGGTGCTGAACAAAATCAAACCGTTGAATCCGAGTCAGCTGCATCTCTTTACAAGGATGAGCATAAAGCCTCTGGTAAAAAACTTATGGCACGCCATTCGTTTAATCGAAGCCGTGGCCAAAATTGA 2634 48.29 MREEGISSSGDPLLFPNSPPPTAAASSAGASSPAVATNAGSADWLGHGQGSKAGSLSRISSQPVWISLSTSAGGSALGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCARRGWVNLDVDKIQCESCGENLKYNGQDSWARTEGENDEEFANLLDEGHNATCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLIQFPYLPVVANSAIDQMKLSRSLEIDRFLVQSTVYPGDVMSDSEISIYLRAQKLISLCGWEPRWLPNVQDCEEHSAQSARNGGSFSPKKDQDPFQGPSKKRVTNSTKKGSRVKSKFDSGSLLLDCSLCGATVRILDFVRVNLPARLAPNNIDVPDTSKKMAVTRGASAASAISGWVAADGAEDEQTEDVGEAAVSNVRMDLNLTMGSGLSTGHGTKRPISELYQDGNLGRDLVIGQPAGSEVGDRAASYESRGPTFKRNIDEGGSTVDRPHELIRQADSVEGVVIDRDGDEINDSKTSTGPSKRACESSSGAGPSQTLYFDIGQPGPSSQGYEHAAHASSVIAMDTICHSEDNDSMESVENHPGFNDEVNYPSTSAVNHDLNETSDMNHSTQGQQSTSVWVNSEIGVSSTNYEEVVNTDAARREGPSLAISGGSVGMAASHEAEIHGLIHRTESVVGDMEPVTGVTENQGQTGEFVPEEMQQEYSGRGDSGSKVVGSVKGESVESGEKTSDLNLLPHEQNSHPSLSCNAVVYSGLELSKDEVMQARKSSPNEECGYPSYPPATELGPPNGESKYEEPVEFDPIRHHNFFCPWVNGNVAAAGVVEHNNGASSSSSSSALALCGWQLTLDALDGFQGAEQNQTVESESAASLYKDEHKASGKKLMARHSFNRSRGQN 877
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02823 877 MobiDBLite consensus disorder prediction 1 53 - -
Bial16g02823 877 MobiDBLite consensus disorder prediction 842 877 - -
Bial16g02823 877 MobiDBLite consensus disorder prediction 278 315 - -
Bial16g02823 877 MobiDBLite consensus disorder prediction 20 38 - -
Bial16g02823 877 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 875 - GO:0005634(PANTHER)
Bial16g02823 877 MobiDBLite consensus disorder prediction 750 777 - -
Bial16g02823 877 MobiDBLite consensus disorder prediction 685 711 - -
Bial16g02823 877 Pfam C3HC zinc finger-like 86 206 IPR012935 GO:0008270(InterPro)
Bial16g02823 877 MobiDBLite consensus disorder prediction 489 534 - -
Bial16g02823 877 MobiDBLite consensus disorder prediction 439 469 - -
Bial16g02823 877 MobiDBLite consensus disorder prediction 497 526 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02823 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
26358 Bial15g01629 Bial16g02823
28258 Bial16g02823 Bial3g01694
189360 Bial4g03428 Bial16g02823
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr15:59441275 Bial16g02823 Bial-Chr16:72356167 wgd
Bial Bial-Chr16:72356167 Bial3g01694 Bial-Chr3:58998376 wgd
Bial Bial-Chr16:72356167 Bial4g03428 Bial-Chr4:78074328 wgd