AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02825 | ATGATGCTCCGAGTATTAAAACCCACGTTGTCTTTCACCGGCCGTCGGCGGCTAACCACCACCACCGCCACCGCCACCGTCGTAATGGGTTTCGGCGACGGCAGCCACGGTGCTCTTGGGTTACCCACATCCACCGGACTCGGTTCCGACGCGTACGAACCAACTCCGATCACAACGCTACCGCCCAACGTATCCACCGTGGCCGCCGGCCACTACCACTCTCTCGCCGTTACTTCCGACGGCCACTTATGGACGTGGGGCCGGAATGTTGAGTGTCAACTTGGCCGTGATATTATTAATTCCCCTAGGGAAAAGTGGGTTGAACCGGGAAGAGTAAACGGGTTGAATGGTGTCCGCTCGGCATCTGCGTCTGGCGTTGTGTCTGCAGCTATTGGAGTTGACGGGTCGTTATGGATTTGGGGGAAATCGAAGCGTGGGCAGTTAGGACTTGGAACCGGGATCACAGAGTCTGTTGTTCCTTCAAGGGTTAAAGTTCTTGATAAAGAAGAGATAATAAAGGTGTCATTTGGATGGGGGCATGCACTTGCACTAACAAAAGACGGAAAGTTATATGGCTGGGGATATTCAGCAGATGGCAGATTAGGAAAGAGGACAATTATGGGTGTTTCGCCTCTTGATTCAAATACTAATTTATCGTCAAGTTTAAAGCTTGAAGATGCGGAGAAAGTGGTGTTGGAAGCTATGGACAAGGAGAACAATATGCCGATAATCTGGGAACCTTGTATAATCGATGAACTTAAAGGCGTTGAAGTTGCAGACGTGTCATGTGGGCTCGATCATACCTTAGTTCTTCTACGTGATGGAACTTTACTCAGTGGTGGAAGCAATGCATATGGTCAACTGGGTCGGTCAACGCAAGATACGGACTTTCTACCAGTTGACATAAGTGTCTACCCGGTCTCCATCGCATCCGGGCTAGGCCACTCGTTAGCAATATGCAGAATCCCATCAGCAGAAGGCGGTGGGGGTATGTTAGGCATTTATTCATGGGGTTGGGGTCGGGATTCTCAGCTCGGGAGAGAGGGTCCCACCAACATCCCATTGCCCGTGGACGGGCTTTTAGGTGAAAACCTGGTGTCAGTGTCAAGTGGGCGTGTGCATACCATTGCTGTCACGGCTAGTGGTGAGGCGTTTTCGTGGGGGTGTGGTAGGAATGGGCGGCTCGGGCTGGGTAGTTCTGCGAATGAGCCCGAGCCCATGTTGGTTGAGTTTTCAGAAGGGGTTAATGTTTTGCAAGCGGTTGCAGGGTTTGATCATACCCTGGTTCTAACCAGCAACTAA | 1302 | 51.38 | MMLRVLKPTLSFTGRRRLTTTTATATVVMGFGDGSHGALGLPTSTGLGSDAYEPTPITTLPPNVSTVAAGHYHSLAVTSDGHLWTWGRNVECQLGRDIINSPREKWVEPGRVNGLNGVRSASASGVVSAAIGVDGSLWIWGKSKRGQLGLGTGITESVVPSRVKVLDKEEIIKVSFGWGHALALTKDGKLYGWGYSADGRLGKRTIMGVSPLDSNTNLSSSLKLEDAEKVVLEAMDKENNMPIIWEPCIIDELKGVEVADVSCGLDHTLVLLRDGTLLSGGSNAYGQLGRSTQDTDFLPVDISVYPVSIASGLGHSLAICRIPSAEGGGGMLGIYSWGWGRDSQLGREGPTNIPLPVDGLLGENLVSVSSGRVHTIAVTASGEAFSWGCGRNGRLGLGSSANEPEPMLVEFSEGVNVLQAVAGFDHTLVLTSN | 433 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02825 | 433 | Gene3D | - | 328 | 433 | IPR009091 | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 188 | 274 | IPR000408 | - | |
| Bial16g02825 | 433 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 67 | 77 | IPR000408 | - | |
| Bial16g02825 | 433 | SUPERFAMILY | RCC1-BLIP-II | 107 | 432 | IPR009091 | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 135 | 187 | IPR000408 | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 81 | 134 | IPR000408 | - | |
| Bial16g02825 | 433 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 134 | 184 | IPR000408 | - | |
| Bial16g02825 | 433 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 334 | 378 | IPR000408 | - | |
| Bial16g02825 | 433 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 381 | 430 | IPR000408 | - | |
| Bial16g02825 | 433 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 258 | 287 | - | - | |
| Bial16g02825 | 433 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 64 | 89 | - | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 382 | 433 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 190 | 204 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 377 | 398 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 64 | 77 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 174 | 190 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 27 | 43 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 135 | 151 | IPR000408 | - | |
| Bial16g02825 | 433 | PRINTS | Chromosome condensation regulator RCC1 signature | 83 | 99 | IPR000408 | - | |
| Bial16g02825 | 433 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 28 | 96 | IPR051210 | - | |
| Bial16g02825 | 433 | Gene3D | - | 10 | 231 | IPR009091 | - | |
| Bial16g02825 | 433 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 261 | 271 | IPR000408 | - | |
| Bial16g02825 | 433 | Gene3D | - | 232 | 327 | IPR009091 | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 26 | 80 | IPR000408 | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 332 | 381 | IPR000408 | - | |
| Bial16g02825 | 433 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 275 | 322 | IPR000408 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02825 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189361 | Bial4g03431 | Bial16g02825 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:72390372 | Bial6g00938 | Bial-Chr6:14489156 | dispersed | |
| Bial | Bial-Chr16:72390372 | Bial4g03431 | Bial-Chr4:78100785 | wgd |