Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02875 | ATGCATATCGGAATTAGGGTTTATTCAAATCCTATAAACCCTAACTCCACATTCAAATTCCGTAAGCATCAATCAGTTCTAATGGACGGCCGTAGAACTAATCTCACTTCAATCAAAGCTCAACAGTCTGGCACGAAGGACGGGCCTATAATTTCCGATGCAACCAGTGATTCAGTATCTGAAGAATTGAAAAGCAAAGAGTGGGAAATTGGGGCTCTTAAAGACGAAATAGCTGCAACTCAGGGAATTCAGATAAGAAGACGACCTCCATCCGGACCTCCTTTGCATTATGTTGGTCCTTTTGAGTTTCGGTTACAGAACGAAGGGAATACTCCTCGTAACATACTAGAGGAAATTGTATGGAACAAAGATACAGAGGTTGCAAAGATGAAAGAGAAAAGGCCAATATTTACATTAAGAAAGGCTATTGAAAATGCTCCTCCTCCGAGAGACTTTCTAGGAGCTCTTAAGGCATCGTATTTAAGAACGGGACTGCCTGCTTTAATTGCTGAAGTGAAAAAGGCTTCCCCGAGTAGAGGCGTTCTAAGGGAAGATTTTAATCCTGTTGAAGTTGCACAAGCTTATGAGAAAGGTGGAGCCGCGTGCCTTAGTGTTTTGACTGATTCAAAATATTTTCAGGGAAGCTTTGAGAATCTAGAGGCTATACGTAGTGCTGGAGTCAAGTGCCCTCTTTTGTGCAAAGAGTTTATTGTGGATGCATGGCAGTTGTATTATGCAAGAACAAAGGGTGCGGATGGTGTTTTGTTGATTGCAGCTGTTTTACCAGATCTTGATATAAAATATATGCTTAAGATTTGCAAAATGATTGGACTTACTGCACTCGTTGAGGTGCATGATGAGAATGAAATGGATCGGATGCTGGCAATTGATGGAATTGAACTTATTGGCATCAATAATCGCAACCTTGCAACATTTGAAGTGGATATCGGTAACACAAAGAAGTTGCTCGAAGGAAAACGTGGGGAAATGATCCGACAAAAGGACATAATGGTGGTCGGGGAGTCAGGACTGTTCACTCCTGCAGACATTGCTTATGTACAAGAAGCCGGTGTGAAAGCCATATTGGTCGGTGAGTCGATTGTGAAGCAGAAAGATCCAACACAAGGAATTAAAGATCTTTTTGGTAAAGATATAACGGGTTAG | 1164 | 41.49 | MHIGIRVYSNPINPNSTFKFRKHQSVLMDGRRTNLTSIKAQQSGTKDGPIISDATSDSVSEELKSKEWEIGALKDEIAATQGIQIRRRPPSGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDTEVAKMKEKRPIFTLRKAIENAPPPRDFLGALKASYLRTGLPALIAEVKKASPSRGVLREDFNPVEVAQAYEKGGAACLSVLTDSKYFQGSFENLEAIRSAGVKCPLLCKEFIVDAWQLYYARTKGADGVLLIAAVLPDLDIKYMLKICKMIGLTALVEVHDENEMDRMLAIDGIELIGINNRNLATFEVDIGNTKKLLEGKRGEMIRQKDIMVVGESGLFTPADIAYVQEAGVKAILVGESIVKQKDPTQGIKDLFGKDITG | 387 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02875 | 387 | CDD | IGPS | 152 | 380 | IPR013798 | GO:0004425(InterPro) | |
| Bial16g02875 | 387 | SUPERFAMILY | Ribulose-phoshate binding barrel | 123 | 382 | IPR011060 | - | |
| Bial16g02875 | 387 | ProSitePatterns | Indole-3-glycerol phosphate synthase signature. | 168 | 186 | IPR001468 | GO:0004425(InterPro)|GO:0006568(InterPro) | |
| Bial16g02875 | 387 | Pfam | Indole-3-glycerol phosphate synthase | 116 | 380 | IPR013798 | GO:0004425(InterPro) | |
| Bial16g02875 | 387 | Hamap | Indole-3-glycerol phosphate synthase [trpC]. | 114 | 382 | IPR013798 | GO:0004425(InterPro) | |
| Bial16g02875 | 387 | FunFam | Indole-3-glycerol phosphate synthase chloroplastic | 108 | 386 | - | - | |
| Bial16g02875 | 387 | PANTHER | TRYPTOPHAN BIOSYNTHESIS PROTEIN | 56 | 383 | IPR045186 | GO:0000162(PANTHER)|GO:0004425(InterPro)|GO:0004425(PANTHER)|GO:0004640(PANTHER) | |
| Bial16g02875 | 387 | Gene3D | Aldolase class I | 108 | 386 | IPR013785 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02875 | K01609 | indole-3-glycerol phosphate synthase [EC:4.1.1.48] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189384 | Bial4g03473 | Bial16g02875 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:73200394 | Bial4g03473 | Bial-Chr4:79063272 | wgd |