AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02878 ATGTGCGTGTTAATGGCGGCAATACTAGCTTCTAACAGCTGCTATTGCCGTGATGTTGAATTAGTAAATCAAGGTAGAACACCGGACAATCTCAGATTCACAAGATCTGTTTCTTCACATAAAATCCACAGATTTCATGTTAAGATGCAGCAGACCGAATCACCTATGAAAACTAGCACCAACAGTCAACCTTCAAAAATTTGTACAAATGGTCAACCTCTGAAGTTGGGAAGCAAAGGTCAAAAAATCACCATGGTTCCCACCAGTGAGGTGATGAATAATAAACCCATGTCAAAGCAAAGATCAGAAACAGTAAACGGATCGATACAAGTAGTTAACGGGACGAGTCTTATTAAGTCTGCAAAAGTTAAACAACCTATAGGATTCCCACCGTCTGAACAATTTAAAATTTTACCATCAGACGAAAGTTTCAAATGGGCGAATGAGAATTATAACTCGGTTCAAAGATCAATAGACGTGTGGTCATTTGTTCTTTCGTTACATGTTCGTGTTCAGTTTGACAATGCAAAGTGGACATATGCTGGTTCCTTCACAGAAGAAAAACAGAAAATCAGAAGAAGAAAAACAGCTTTGTGGTTAAAAGAACGCGTGCTTCAACTTGGTCCAACTTTTATAAAACTTGGCCAGTTATTCTCAACAAGATCAGATTTATTCCCACATGAATTTGTTGATGAACTCGCCAATTTACAGGATAGAGTGCCAGCTTTCTCAACAGAAAAAGCAAAAGGTTTTATCGAGAATGAATTAGGAGCTCCAGTTGATGTACTTTTTCGGGAATTTGAAGAACGACCCATTGCAGCTGCTAGTCTCGGTCAGGTGCATCGTGCGATATTACATAATGGAGAGAAAGTAGTCGTTAAAGTTCAAAGGCCCGGTTTGAAGAAACTTTTTGACATCGATTCAAGAAATTTAAAGCTAGTTGCAGAGTATTTTCAAAGAAGTGAAACTTTTGGCGGTCCTACAAGGGACTGGATAGGTGTCTATTATGAATGTGAAAAGCTTTTATACCAGGAGATTGATTATATAAACGAAGGGAAAAATGCTGATAGATTTCGTCGAGATTTTCGCAACATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCTACAAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAAATCAATAATCTAGATATGATAAAACAAAAGGGTTACAGCCGATCCCGAATCTCTTCACGTGCCATTGAATCATACTTGATTCAGATTCTTAAAACAGGTTTCTTTCATGCTGATCCTCATCCCGGGAATCTTGCTATTGATGTTGATGAATCTTTAATCTACTATGATTTTGGTATGATGGGGGAGATTAAGTCACTCACAAGAGAAAAACTGATGGAACTTTTTTATGCAATTTATGAAAAAGATGCAAAAAAGGTGATGAACAGTTTGGTAAACCTTGGAGCACTTCAGCCTACTGGAGACATGTCATCAGTTAGGAGATCAATTCAGTTCTTTTTGGATAATTCATTATATCAATCACCAGACCAGGATCAAACTTTGGCTGCAATAGGCGAGGACTTATTTTCTATAGCAACAGATCAACCTTTCCGGTTCCCGTCCTCCTTTGCTTTTCTAATGAAGGCATTTTCCACTGTTGAAGGAATCGGATACTCACTGGATCCAAATTTTTCATTTGTCAAAATCGCTTCACCATACGCACAGGAGCTGTTAGATCTCAAACAACAGCAGCCCAGTGGACCGCAACTTGTTGCTGAAATGCAAAAACAAGCTGATGATGCAAGATCAAACACTATGTCAATGCCTTACAGAGTTCAAAAGATCGAAGAGTTTGTTAAACAACTAGAAGTCGGAGACCTTAAACTTCGTGTCAGAGTTCTCGAGTCTGAGAGAGCAGCTCGGAAGGCGACAATGCTGCAAATGGCAACCATGTACACAGTTATAAGCGGTGCTCTTATTAATCTCGGTGTCACGTTTAGCATGCAAGGCAAACATCTCTTAGCAAAGGGGTCATTTCTTGCTGCAGGACTTTTGATAGCATTGCTTGTTAGGTCCATGAAAAGGGTGAAGTTTCATGATAAACTTGAAAAGATGATTTAA 2115 39.15 MCVLMAAILASNSCYCRDVELVNQGRTPDNLRFTRSVSSHKIHRFHVKMQQTESPMKTSTNSQPSKICTNGQPLKLGSKGQKITMVPTSEVMNNKPMSKQRSETVNGSIQVVNGTSLIKSAKVKQPIGFPPSEQFKILPSDESFKWANENYNSVQRSIDVWSFVLSLHVRVQFDNAKWTYAGSFTEEKQKIRRRKTALWLKERVLQLGPTFIKLGQLFSTRSDLFPHEFVDELANLQDRVPAFSTEKAKGFIENELGAPVDVLFREFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDSRNLKLVAEYFQRSETFGGPTRDWIGVYYECEKLLYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNLDMIKQKGYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSLTREKLMELFYAIYEKDAKKVMNSLVNLGALQPTGDMSSVRRSIQFFLDNSLYQSPDQDQTLAAIGEDLFSIATDQPFRFPSSFAFLMKAFSTVEGIGYSLDPNFSFVKIASPYAQELLDLKQQQPSGPQLVAEMQKQADDARSNTMSMPYRVQKIEEFVKQLEVGDLKLRVRVLESERAARKATMLQMATMYTVISGALINLGVTFSMQGKHLLAKGSFLAAGLLIALLVRSMKRVKFHDKLEKMI 704
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02878 704 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 79 636 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Bial16g02878 704 MobiDBLite consensus disorder prediction 50 73 - -
Bial16g02878 704 CDD ABC1-ADCK3-like 236 482 - -
Bial16g02878 704 MobiDBLite consensus disorder prediction 51 73 - -
Bial16g02878 704 Pfam ABC1 atypical kinase-like domain 236 481 IPR004147 -
Bial16g02878 704 SUPERFAMILY Protein kinase-like (PK-like) 237 571 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02878 K03688 ubiquinone biosynthesis protein
Bial16g02878 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:73234627 Bial22g02780 Bial-Chr22:36645419 dispersed
Bial Bial-Chr12:54378789 Bial16g02878 Bial-Chr16:73234627 wgd
Bial Bial-Chr16:73234627 Bial24g02261 Bial-Chr24:53239523 wgd
Bial Bial-Chr16:73234627 Bial4g03476 Bial-Chr4:79093032 wgd