Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02983 | ATGGGGTCCGCGTGTTGTGTTGCTGCTAGAGATAGAACTATAACAGATCGGTCTAGTAATGATATTATTATTACAAGAAATGATCATTATTCGCCATCCTGGAGCTTTAGGTGGGATAACCGGGGGCGTGTGGCGGGCGAAGACTCATCCATTAATGACAGGTTGGATAATAAGTCTCATACAACTGTGGAAACTGCTTATGCAACAGAAGGCAGCCCGTTGGACAGCTCTAGAAGCCTGACGTGGCAAAAATCACCACTTTCTGAAGAGATTGGGCTTCCTCAATTAGATACTCTGAGTTCCAAAAATCTTCATGAGGCGAAAGATCCAAGGGGAACCCAAACTCCAGTAGCTATGGAACTGTCTCCAACCAACATGTTGACCCCAGCGCATTCAATTTCATCCTTGTCAGCAGCATCTCCTTTGTCTTCGTCCCAAAGTCAACTCATGCCCATGTCAAGTTTAACCCCGTCAAGATGGTCCCGCCGCTCGCCAGGTCACCATCATCTACTCCGTCAAGTATCAGATAGCCGAATTCGTGGCATGATGTCACCAAACTTCTCAATATCCGAAGACGGTTCTCCTTTTATGCACCACCCCGGGTGGACTAATAAGTCAAACATCGGGTCCCATGGCGGTTCTTCAGATAGCTGGTCAAATAGAGATAGATGGTCTTTTGACAGTGATGCTATGAGCTTTAGTCGTGATAGATTTAGCCGATCTAGGGTGTCTTCCTCTCCAACCGTTGAGATCGTGGCATGTGGCATCTGTTCCAAGCTTTTAACCGAACGGTCCACTTGGAGCAGCCATAAAGTCATGGCTAATAACGGGCTTCCCATTGTGTCCGTTCTGATTTGTGGGCACGTTTATCACGCTGAGTGTTTGGAAAACATGACATCCGAGATCAATAAGTATGACCCCGCATGTCCCGTTTGTACTTTGGGAGAAAAAAAGGTTATTAAGATGTCAGGTGAAATGGATTTCAAGGGCAAAATCGGAAAGAAGTTAAGTCGCCATGTGGTTGATGGTGGCAATTCTGGTATTTTTAATCAGTTTACAAATGGCAGGGGTCCCGTGATGGGGTCGAGTTCTAGCATGAAAAGCTCTTCAAAAAAAAGAGATTTTTCTGGTCCAAATCGAGCAAGGAGTGAGGTTTTCGCTTTTATAAAGGTAGGGGATAAAAACAAAGACATAAATGTTTCTTATTTCACCTTCGTTGTCTTTGGGCGCTGA | 1233 | 45.17 | MGSACCVAARDRTITDRSSNDIIITRNDHYSPSWSFRWDNRGRVAGEDSSINDRLDNKSHTTVETAYATEGSPLDSSRSLTWQKSPLSEEIGLPQLDTLSSKNLHEAKDPRGTQTPVAMELSPTNMLTPAHSISSLSAASPLSSSQSQLMPMSSLTPSRWSRRSPGHHHLLRQVSDSRIRGMMSPNFSISEDGSPFMHHPGWTNKSNIGSHGGSSDSWSNRDRWSFDSDAMSFSRDRFSRSRVSSSPTVEIVACGICSKLLTERSTWSSHKVMANNGLPIVSVLICGHVYHAECLENMTSEINKYDPACPVCTLGEKKVIKMSGEMDFKGKIGKKLSRHVVDGGNSGIFNQFTNGRGPVMGSSSSMKSSSKKRDFSGPNRARSEVFAFIKVGDKNKDINVSYFTFVVFGR | 410 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02983 | 410 | SMART | ring-2 | 254 | 312 | IPR001841 | - | |
| Bial16g02983 | 410 | ProSiteProfiles | Zinc finger RING-type profile. | 254 | 313 | IPR001841 | - | |
| Bial16g02983 | 410 | PANTHER | EXPRESSED PROTEIN | 1 | 318 | - | - | |
| Bial16g02983 | 410 | MobiDBLite | consensus disorder prediction | 137 | 161 | - | - | |
| Bial16g02983 | 410 | MobiDBLite | consensus disorder prediction | 137 | 166 | - | - | |
| Bial16g02983 | 410 | MobiDBLite | consensus disorder prediction | 352 | 372 | - | - | |
| Bial16g02983 | 410 | MobiDBLite | consensus disorder prediction | 96 | 117 | - | - | |
| Bial16g02983 | 410 | SUPERFAMILY | RING-U-box | 248 | 313 | - | - | |
| Bial16g02983 | 410 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 238 | 314 | IPR013083 | - | |
| Bial16g02983 | 410 | MobiDBLite | consensus disorder prediction | 352 | 378 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02983 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 27254 | Bial15g03281 | Bial16g02983 | |
| 28278 | Bial16g02983 | Bial3g03083 | |
| 189595 | Bial4g03637 | Bial16g02983 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr14:4332461 | Bial16g02983 | Bial-Chr16:74944542 | dispersed | |
| Bial | Bial-Chr16:74944542 | Bial2g00697 | Bial-Chr2:7647451 | dispersed | |
| Bial | Bial-Chr15:80189768 | Bial16g02983 | Bial-Chr16:74944542 | wgd | |
| Bial | Bial-Chr16:74944542 | Bial3g03083 | Bial-Chr3:75320061 | wgd | |
| Bial | Bial-Chr16:74944542 | Bial4g03637 | Bial-Chr4:81961565 | wgd |