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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02988 ATGGATGACGTCATCTTCTACCGTGTTATTGTTATTGTTAATATGTTGTTGTTGTTAATATTGGAGTCTGTTAATGGAGGATTGACCAGTAGCTTTGTGAGGCAAGCTGACAAGACTGTGGATATGCCAATGGACAGTGATGTGTTTACTCATCCACCTGGTTATAATGCACCTCAACAGTATGATACAAGATACTATTATGAAGTTGGGATTGAAAATAAAAGCACATCAAGAACTTTCTGGTTCACTACTCCTCCTGAAGTTGGACCAGATGTACCTTATACTTTTGGCCTTATTGGAGATCTTGGTCAAAGTTTTGACTCGAATGCGACACTTACTCATTATGAAATGAATCCGATAGAAGGGAAAACCGTATTGTTTATGGGAGACATTTCTTATGCTGATAACTATCCGGATCATGATAACACGAGATGGGATTCGTGGGGTCGGTTTGCTGAGAGAAGTACAGCTTATCAACCTTGGATATGGACTGCCGGAAATCATGAAGTTGATTTTGCACCCAAACTTGTACGCTTCCTTTGA 543 39.78 MDDVIFYRVIVIVNMLLLLILESVNGGLTSSFVRQADKTVDMPMDSDVFTHPPGYNAPQQYDTRYYYEVGIENKSTSRTFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNATLTHYEMNPIEGKTVLFMGDISYADNYPDHDNTRWDSWGRFAERSTAYQPWIWTAGNHEVDFAPKLVRFL 180
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02988 180 Gene3D - 89 179 IPR029052 -
Bial16g02988 180 PANTHER ACID PHOSPHATASE RELATED 60 175 IPR039331 GO:0003993(InterPro)
Bial16g02988 180 SUPERFAMILY Metallo-dependent phosphatases 94 175 IPR029052 -
Bial16g02988 180 Pfam Calcineurin-like phosphoesterase 95 169 IPR004843 GO:0016787(InterPro)
Bial16g02988 180 Gene3D - 44 88 - -
Bial16g02988 180 SUPERFAMILY Purple acid phosphatase, N-terminal domain 60 86 IPR008963 GO:0003993(InterPro)|GO:0046872(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02988 K22390 acid phosphatase type 7
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Event-related genes

Select Gene_1 Gene_2 Event_name
26324 Bial15g01485 Bial16g02988
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:74993776 Bial3g01562 Bial-Chr3:55928640 dispersed
Bial Bial-Chr12:55289582 Bial16g02988 Bial-Chr16:74993776 wgd
Bial Bial-Chr15:56176613 Bial16g02988 Bial-Chr16:74993776 wgd
Bial Bial-Chr15:80215362 Bial16g02988 Bial-Chr16:74993776 wgd
Bial Bial-Chr16:74993776 Bial3g03091 Bial-Chr3:75350803 wgd
Bial Bial-Chr16:74993776 Bial4g03641 Bial-Chr4:82007242 wgd