AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial20g00128 ATGTATGTGGTGGAAAGCAGAGGAGGTGCGATCGCATGCATGCTGCTTTCACTCTTCTTCCTTGGAACATGGCCCGCCATTTTAACGTTGTTGGAACGACGCGGCAGGCTGCCTCAACACACTTACCTTGACTACACATTCACCAATCTTTTGGCTGCTGTTATAATTGCCTTCACATTTGGGGAGTTTGGTCATACAAATGACGGTAAACCGAATTTTCTTGTCCAGCTTTCTCAGAATAACTGGCCAAGTGTTCTGTTTGCAATGGGGGGTGGTGTGGTATTGAGTCTGGGAAATCTATCAACACAATATGCATGGGCATTTGTCGGTTTATCGGTAACCGAAGTGATCACTTCAAAAAAAGATTTGGAGTATGCAAGCGGTAAAGTCGAGAAAGCGAAAGCAGGGACTGCAAATTTTCTTATTGAACTCGAAGGCCGAAGAGCAATCAAGGTGTTTGGAAAAAGCACATTGATCGGTTTGGGCATATGTTTGTTTGCGGGCGTTTGTTTCTCTCTTTTCTCACCGGCTTTTAATCTTGCAACGAATGACCAATGGCATACACTGGACGACGGCGTCCCTCATTTAAGTGTCTACACTGCTTTTTTCTACTTCTCGTGCTCGTGTTTTGTCATTGCAATGATCTTAAACATAACACTCCTTTACCGCCCGGCATTCAACTTGCCTCAATCTTCGATCCACGCGTATTTAAACGACTGGGACGGTCGAGCCTGGGCGTTACTGGCGGGATTTTTGTGTGGGTTCGGGAACGGTCTACAGTTTATGGGAGGCCAGGCTGCTGGTTATGCTGCAGCTGATGCGGTTCAGGCACTACCACTTGTGAGTACCTTTTGGGGTGTGCTCTTTTTTGGTGAATACCGCAAATCGTCTAGAAGAACATACGTGCTACTCGCAGGCATGTTGTCCATGTTTATTGTGGCTGTTGGAGTTTTAATGGCGTCGTCAGGACACCGAAAACATTAA 984 46.24 MYVVESRGGAIACMLLSLFFLGTWPAILTLLERRGRLPQHTYLDYTFTNLLAAVIIAFTFGEFGHTNDGKPNFLVQLSQNNWPSVLFAMGGGVVLSLGNLSTQYAWAFVGLSVTEVITSKKDLEYASGKVEKAKAGTANFLIELEGRRAIKVFGKSTLIGLGICLFAGVCFSLFSPAFNLATNDQWHTLDDGVPHLSVYTAFFYFSCSCFVIAMILNITLLYRPAFNLPQSSIHAYLNDWDGRAWALLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVLFFGEYRKSSRRTYVLLAGMLSMFIVAVGVLMASSGHRKH 327
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial20g00128 327 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 120 326 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0022857(InterPro)|GO:0071705(InterPro)
Bial20g00128 327 Pfam Ureide permease 41 119 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Bial20g00128 327 Pfam Ureide permease 120 321 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial20g00128 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
187711 Bial8g00363 Bial20g00128
197918 Bial20g00128 Bial8g00363
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr20:1454023 Bial8g00364 Bial-Chr8:4053783 dispersed
Bial Bial-Chr20:1454023 Bial20g00129 Bial-Chr20:1498993 tandem
Bial Bial-Chr20:1454023 Bial8g00363 Bial-Chr8:4023408 wgd