AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial20g00141 | ATGTGTGTAAAGATGGCTCATTTGGAAACAAACAGAGGTGAAGTGAGAATCCATGAAAGTTTGGACGAACTCAGCACGAATTTGGCTGATTACATAGCAGAGTTATCCGAGGTGTCAGTCAAAGAACGAGGCTTTTTCGCCATTGCTTTGTCTGGTGGTTCGGTTATTACCTTGATGAGGAATCTGTGTGGAGCTCCTTATAACAAGACTGTTGATTGGTCAAAATGGTATATATTTTGGGCCGATGAACGAGTCGTTGCGAAGAATCATGCTGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCTAAGTTGCCTATTGTTCCTAGTCATATACATTCCATCAACGATTCTTTAACCGCAGAAGAAGCTGCAAACGAGTACGAGTTCGTGATCCGACAACTGGTCAGGACCCGCGTGGTCAACGTGTCCGAGGTCAGCGACTGCCCAAAGTTTGACTTAATCCTTCTTGGGATGGGCCCGGATGGCCACGTGGCGTCTTTATTTCCTAACCATTCGGTTCTTGAAGAAAAGAACGAATGGGTGACGTTTATCACCACTTCCCCTAAGCCTCCGCCCGAGAGAATAACATTCACACTGCCTGTTATCAACTCGGCTGCCAATGTAGCAGTGGTCGTGACAGGTGGCGGGAAGGCGGAGGCTGCCCATCTGGCGATAGGTGATGTGGGACCAGGGGGTCCGGTTTTGCCAGCTAGGATGATCGAACCGAGTGTTGGGAAACTGGTGTGGTTTTTGGATAATTTTGCTGCTTCAAAGATTAATGGTTTTGATTAA | 798 | 46.62 | MCVKMAHLETNRGEVRIHESLDELSTNLADYIAELSEVSVKERGFFAIALSGGSVITLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHADSNYKLAKDHLLSKLPIVPSHIHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSEVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGGKAEAAHLAIGDVGPGGPVLPARMIEPSVGKLVWFLDNFAASKINGFD | 265 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial20g00141 | 265 | CDD | 6PGL | 22 | 253 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Bial20g00141 | 265 | FunFam | Probable 6-phosphogluconolactonase | 10 | 262 | - | - | |
| Bial20g00141 | 265 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 9 | 261 | IPR039104 | - | |
| Bial20g00141 | 265 | Coils | Coil | 21 | 41 | - | - | |
| Bial20g00141 | 265 | Gene3D | - | 10 | 263 | - | - | |
| Bial20g00141 | 265 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 15 | 262 | IPR037171 | - | |
| Bial20g00141 | 265 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 21 | 251 | IPR006148 | GO:0005975(InterPro) | |
| Bial20g00141 | 265 | NCBIfam | 6-phosphogluconolactonase | 17 | 260 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial20g00141 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 187717 | Bial8g00376 | Bial20g00141 | |
| 197924 | Bial20g00141 | Bial8g00376 | |
| 364209 | Bial13g00227 | Bial20g00141 | |
| 372693 | Bial1g00174 | Bial20g00141 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 702058 | Bial | Bial20g00141 | Bial-Chr20:1605283 | Bial24g01007 | Bial-Chr24:37531004 | |
| 774798 | Bial | Bial1g00174 | Bial-Chr1:1757130 | Bial20g00141 | Bial-Chr20:1605283 | |
| 799872 | Bial | Bial13g00227 | Bial-Chr13:2539079 | Bial20g00141 | Bial-Chr20:1605283 | |
| 835666 | Bial | Bial20g00141 | Bial-Chr20:1605283 | Bial8g00376 | Bial-Chr8:4159054 | |
| 836844 | Bial | Bial20g00141 | Bial-Chr20:1605283 | Bial9g02642 | Bial-Chr9:71262555 |