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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial20g00142 ATGGATGTTCAAGAATGTGTTACTCTTCATGTTCAAAGTGAGTTATCGGTTGAAGATTGGCCTTTGTTTCACGTTGCAAGTACGGGAGTGACTAGTCGTGGACGGGTTGAAAAGCGGGAGTATGAGATCAACGTCGAAGAGGTGGTGGAAGGTCGTGAGAATGTTCGTGTTGAAAGCGAGCCGGTGAATAGCGAAGGAGGGGAACATGAAGAGAATGTGAATGCTGTTATGATGGATGAAGAAAAAGGGTTTGGAAGAGCTTTTGTTATACGACAACGACAACAACAGGTTCAGCATGGTGTGAATCAACGTCGTGTTGTTCCTGATGTTAAAGTTGTTCCTGATGTTACTGTCTGGACGTGCCTTTTTGAGAATGCACGAACCGTCTATGACTTGTCTTCGTATCTGGATGAGCACCCTGGTGGCGATGATGTCATTCTACAGGCTACAGGGAAAGACGCGACAAATGAATTTGAAGATGCAGGCCATAGCAAAACGGATAGGGAACTTCTGGAGACTTTTTGTGTTGGCGAGCTTGACCCGTCAGACATCCCTCAACTTGAAGTAGTTTCAGAGAAACAAAAAGGGTACATCCCTGAGAAATTGGTTGACCTGAGTAAGCAATACTGGGTGGCTCCGGTGGCGGCTGTTGGCATATCGGTGGTCGTCACATTTTTGTACTTGCGCAACAAGTAG 696 46.12 MDVQECVTLHVQSELSVEDWPLFHVASTGVTSRGRVEKREYEINVEEVVEGRENVRVESEPVNSEGGEHEENVNAVMMDEEKGFGRAFVIRQRQQQVQHGVNQRRVVPDVKVVPDVTVWTCLFENARTVYDLSSYLDEHPGGDDVILQATGKDATNEFEDAGHSKTDRELLETFCVGELDPSDIPQLEVVSEKQKGYIPEKLVDLSKQYWVAPVAAVGISVVVTFLYLRNK 231
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial20g00142 231 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 135 142 IPR018506 GO:0020037(InterPro)
Bial20g00142 231 PRINTS Cytochrome B5 signature 129 139 IPR001199 -
Bial20g00142 231 PRINTS Cytochrome B5 signature 139 153 IPR001199 -
Bial20g00142 231 PRINTS Cytochrome B5 signature 154 161 IPR001199 -
Bial20g00142 231 PRINTS Cytochrome B5 signature 167 179 IPR001199 -
Bial20g00142 231 SUPERFAMILY Cytochrome b5-like heme-steroid binding domain 122 187 IPR036400 -
Bial20g00142 231 Gene3D - 101 192 IPR036400 -
Bial20g00142 231 SMART Cyt-b5-2 123 180 IPR001199 -
Bial20g00142 231 Pfam Cytochrome b5-like Heme-Steroid binding domain 122 180 IPR001199 -
Bial20g00142 231 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 119 180 IPR001199 -
Bial20g00142 231 PANTHER CYTOCHROME B5 127 226 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial20g00142 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
187718 Bial8g00378 Bial20g00142
197925 Bial20g00142 Bial8g00378
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
702059 Bial Bial20g00142 Bial-Chr20:1660735 Bial21g00729 Bial-Chr21:9844268
755693 Bial Bial8g00378 Bial-Chr8:4211942 Bial20g00142 Bial-Chr20:1660735
835667 Bial Bial20g00142 Bial-Chr20:1660735 Bial8g00377 Bial-Chr8:4203799
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bial4g01382 ACH,BST,WGDA 31 281 NADPH P450 reductases gene family AT5G17770 82.47 1.38e-160 446.0
Bial18g01710 . 5 29 NADPH P450 reductases gene family AT5G48810 68.0 3.90e-07 45.8
Bial12g00558 . 1 127 NADPH P450 reductases gene family AT5G53560 54.688 1.43e-44 147.0
Bial2g00179 . 39 281 NADPH P450 reductases gene family AT5G17770 41.379 1.65e-64 203.0
Bial2g00988 BST,WGDA 26 134 NADPH P450 reductases gene family AT5G48810 50.459 3.98e-32 108.0
Bial12g00798 ACH,BST,WGDA 38 273 NADPH P450 reductases gene family AT5G17770 38.76 1.43e-48 172.0
Bial24g00755 . 38 273 NADPH P450 reductases gene family AT5G17770 37.984 7.39e-52 173.0
Bial24g00728 BST,WGDA 38 273 NADPH P450 reductases gene family AT5G17770 37.984 1.62e-48 172.0
Bial9g00394 . 1 134 NADPH P450 reductases gene family AT5G53560 57.037 1.13e-48 155.0
Bial8g00377 . 1 134 NADPH P450 reductases gene family AT1G26340 60.448 3.52e-57 172.0
Bial22g00631 ACH,BST 6 132 NADPH P450 reductases gene family AT5G53560 53.846 2.06e-48 150.0
Bial19g03070 . 5 29 NADPH P450 reductases gene family AT5G48810 68.0 3.83e-07 45.8
Bial7g03737 ACH,BST,WGDA 1 130 NADPH P450 reductases gene family AT5G53560 50.769 1.69e-43 137.0
Bial7g03735 . 1 126 NADPH P450 reductases gene family AT5G53560 51.181 4.48e-43 136.0
Bial12g01959 BST,WGDA 5 29 NADPH P450 reductases gene family AT5G48810 68.0 3.94e-07 45.8
Bial19g03697 ACH,BST,WGDA 1 130 NADPH P450 reductases gene family AT5G53560 50.769 1.69e-43 137.0
Bial12g03895 BST 31 281 NADPH P450 reductases gene family AT5G17770 78.486 1.88e-148 415.0
Bial21g00729 ACH,BST,WGDA 5 133 NADPH P450 reductases gene family AT2G32720 74.419 4.35e-73 212.0
Bial21g00816 ACH,BST,WGDA 30 281 NADPH P450 reductases gene family AT5G17770 80.556 4.07e-158 439.0
Bial21g01842 . 5 29 NADPH P450 reductases gene family AT5G48810 68.0 3.90e-07 45.8
Bial14g00685 BST,WGDA 7 140 NADPH P450 reductases gene family AT5G48810 51.493 3.45e-44 139.0
Bial10g02132 BST 5 60 NADPH P450 reductases gene family AT1G26340 44.643 7.26e-12 57.8
Bial10g02131 BST 6 85 NADPH P450 reductases gene family AT1G26340 38.75 7.92e-16 69.7
Bial10g02011 BST,WGDA 118 281 NADPH P450 reductases gene family AT5G17770 54.268 5.75e-54 168.0
Bial10g01672 ACH 5 29 NADPH P450 reductases gene family AT5G48810 68.0 8.78e-08 44.7
Bial10g00988 BST 37 114 NADPH P450 reductases gene family AT5G53560 46.914 1.42e-18 73.2
Bial5g00026 BST 6 130 NADPH P450 reductases gene family AT2G32720 45.926 9.86e-40 128.0
Bial5g02018 . 1 120 NADPH P450 reductases gene family AT1G60660 62.5 3.51e-50 153.0
Bial23g01260 . 38 273 NADPH P450 reductases gene family AT5G17770 39.147 1.56e-49 175.0
Bial17g02981 BST 6 130 NADPH P450 reductases gene family AT2G32720 46.667 4.90e-40 129.0
Bial24g01827 BST,WGDA 5 29 NADPH P450 reductases gene family AT5G48810 68.0 3.90e-07 45.8
Bial19g00029 . 1 137 NADPH P450 reductases gene family AT5G48810 48.905 1.14e-45 144.0
Bial22g01668 BST 6 85 NADPH P450 reductases gene family AT1G26340 38.75 9.97e-16 69.3
Bial22g01543 BST,WGDA 31 281 NADPH P450 reductases gene family AT5G17770 77.291 9.38e-147 410.0
Bial9g00745 ACH,BST,WGDA 5 133 NADPH P450 reductases gene family AT2G32720 74.419 4.35e-73 212.0
Bial9g00824 ACH,BST,WGDA 30 281 NADPH P450 reductases gene family AT5G17770 81.349 1.89e-159 443.0
Bial16g01201 ACH,BST,WGDA 31 281 NADPH P450 reductases gene family AT5G17770 82.47 1.20e-160 446.0
Bial20g01549 ACH,BST 1 133 NADPH P450 reductases gene family AT5G53560 73.684 8.82e-73 212.0
Bial15g01620 . 42 281 NADPH P450 reductases gene family AT5G17770 72.917 2.73e-130 368.0
Bial21g00099 . 5 29 NADPH P450 reductases gene family AT5G48810 68.0 5.50e-07 46.2
Bial3g01685 . 42 281 NADPH P450 reductases gene family AT5G17770 82.917 3.42e-153 436.0
Bial20g00142 BST 30 134 NADPH P450 reductases gene family AT1G26340 56.19 5.32e-36 122.0
Bial24g03587 BST,WGDA 31 281 NADPH P450 reductases gene family AT5G17770 78.486 1.88e-148 415.0
Bial16g01053 ACH,WGDA 5 133 NADPH P450 reductases gene family AT2G32720 73.643 5.61e-71 207.0
Bial16g01701 . 5 29 NADPH P450 reductases gene family AT5G48810 68.0 1.94e-07 45.1
Bial8g01687 ACH,BST 1 133 NADPH P450 reductases gene family AT5G53560 73.684 8.82e-73 212.0
Bial7g00021 . 20 137 NADPH P450 reductases gene family AT5G48810 47.934 6.44e-32 108.0
Bial11g01518 WGDA 38 273 NADPH P450 reductases gene family AT5G17770 39.535 5.34e-50 176.0