AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial21g01676 ATGGCTGGCAATGGCCTCTCAAACTTAGGCCGTGTGAAGCTGACCGATCTGATACCTTCCGAAGGACTTCCATCCGACACATACAAGCTCTCCGTTTCGACATTATCACAGTCACTTGCTCAATACTCTGCTGCAATCATCCAATTCCCCCCAACCGATGCCGCTCTTCTAAGATGCTGTCTAGAATCCGCTCGCCCGTACTTCAACCAGAAACCATCCTACCCATCGCCCGACACCATCCACATAAACGATTCCCGTGAGTGGTGCAAGACATCAGGCTATTCAGCCAATCCTCAAATGTGGCAAGAAAGTTATGATTACCGACCCGGAATCACTCCTACCGAACCAAACGATATCGACTTCCCACCAGCCGGACTGCTTGACATATTCGTCCTGCTTGGTAAAGCCACACGTGGCGTACTTGATGCAGTCACTTTTTACTTAAACCTACGTGGATGCGCCTTCACCGAGATCCTCGATAGTGTCCCGCTGCGAGACCGTGAAATATCGTCTTCGGTTTTGTCAGTTGGCTGTCACGCGAGGCCCTCCTTTCAAGGAGCTCAGCATCACAATTTAACAACCCAAGAAGACGGGCAGTTAGTTATGTTTTCAGATCATGATCATCAAGTTGACAAAAGTGTAATATCTGTTATGAAATCCGATAAACCTGGTTTTCATATTCGGGATTTTAACGGTCGGTGGGTGCTTGTGGATGGTGATTTGGGTCCGCAAGAAGCGGTTGTGTATCCTGGACTCGCTCTGTACCATGCAACTGCTGGTTATGTTAGTCCTGCGTTGCACAGAACTGATATTAATAACTTGCATGGTAATATGTACGGTCGGTGTTCGATTTCGTTTAAACTCATGCCTAAATCTATGACTACTATTAGTTGTTCTGAAATGAGAGCTGCTGGTCACGGTGTTGAAGCGCAGTTCCAGATTCCGGTATTGGTTGATGAGTTCATGCAGCGATCTCATCCGTTGGATCAACTTTTTAACAGAAACAGTTTCCCGAGTTTCAGCTTTCCTACAGCCCAAGAAGGATCTATGAAACCGTTAATGAAGAAAAAGAAGAACAATTCTAGGCTAAAACCATTACCACCCTCTAAACGGTTACGGCTTGAAGCTCAAAGGGTTCTAAAACAGAGAGTTCAGGATATAGCTGATAAGAAAGGAATCAAGCTAAGATTCTGCACATTGAAGGAGTGTGAGAGTCACATTCACACACTTGACAGTCCATGTGGCAACGTACGATTGGAGATTGGGTGGCCCCCGGGTGTGCCCTTTGTTCATCCCCATGACCTACCTAATAAAGCAAAGATTGGGTTTCTTGAAACGTATGAACCCGGTTGGTCGGCTAATCATGATATGGAGCTCAGTTTGATTGAAACCGGACAGCCAAGTCAGCTTGCTGATAACTGTAATCATCTTCACTTGTCTATTATGTTCTGCTTATAG 1458 45.88 MAGNGLSNLGRVKLTDLIPSEGLPSDTYKLSVSTLSQSLAQYSAAIIQFPPTDAALLRCCLESARPYFNQKPSYPSPDTIHINDSREWCKTSGYSANPQMWQESYDYRPGITPTEPNDIDFPPAGLLDIFVLLGKATRGVLDAVTFYLNLRGCAFTEILDSVPLRDREISSSVLSVGCHARPSFQGAQHHNLTTQEDGQLVMFSDHDHQVDKSVISVMKSDKPGFHIRDFNGRWVLVDGDLGPQEAVVYPGLALYHATAGYVSPALHRTDINNLHGNMYGRCSISFKLMPKSMTTISCSEMRAAGHGVEAQFQIPVLVDEFMQRSHPLDQLFNRNSFPSFSFPTAQEGSMKPLMKKKKNNSRLKPLPPSKRLRLEAQRVLKQRVQDIADKKGIKLRFCTLKECESHIHTLDSPCGNVRLEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWSANHDMELSLIETGQPSQLADNCNHLHLSIMFCL 485
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial21g01676 485 SUPERFAMILY Clavaminate synthase-like 97 304 - -
Bial21g01676 485 Gene3D - 23 327 IPR027443 -
Bial21g01676 485 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 475 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial21g01676 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr18:6936375 Bial21g01676 Bial-Chr21:40344947 dispersed
Bial Bial-Chr21:40344947 Bial6g00341 Bial-Chr6:4633214 dispersed
Bial Bial-Chr21:40344947 Bial9g01725 Bial-Chr9:44558254 wgd