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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00743 ATGCTTGCAGGTGCTCCTGTTTCTAACATTTCTGCACAACAATTTGTGTCACGCAGGGACATATCGTCTTTTAAAACAGGTTTTTCAACCCAGAAGTGGACTAGATCTTTTTCTACATACAGTGAACCTGCTAAAATAGAGAAGGTAGTCAACACCTCAGTCAAAGGGGTACACAGTGGCCCTGCTTATTTCACTGCATCTGGTGCTGTACTTGGAAGTGCTTTAAGTACACCCGTTGTAAACGCTCCACAGGCTACTAAACTGGGCCTGAGCTCGACGGTCTCTCCAACTTTCTTACCAAATCTTGCTTTATTTTGGCATATTAATAACGGGATTGAAGAGATTCTGGCTGATTATGTTCACCATGAAATGACCCGCAGCTTGATCTTGGTCATGATGAGACTCTTCCTTATAGTTGCTGCAAAAGACGTGTTTGTGGCTACAAATTGA 450 42.89 MLAGAPVSNISAQQFVSRRDISSFKTGFSTQKWTRSFSTYSEPAKIEKVVNTSVKGVHSGPAYFTASGAVLGSALSTPVVNAPQATKLGLSSTVSPTFLPNLALFWHINNGIEEILADYVHHEMTRSLILVMMRLFLIVAAKDVFVATN 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00743 149 Gene3D Fumarate reductase-succinate dehydrogenase, transmembrane subunit 69 147 IPR034804 GO:0016020(InterPro)
Bial22g00743 149 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 17 149 IPR044963 GO:0005743(InterPro)|GO:0006099(InterPro)|GO:0006121(InterPro)|GO:0045273(InterPro)
Bial22g00743 149 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 96 141 IPR034804 GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00743 K25801 succinate dehydrogenase (ubiquinone) subunit 4
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Event-related genes

Select Gene_1 Gene_2 Event_name
182164 Bial10g01143 Bial22g00743
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:11401043 Bial22g00743 Bial-Chr22:7129573 wgd