AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00836 ATGATCATAATGGGCAATTACAAGTTCAGGTTCTCTTGGTTTCACTCTTCCAACAAAAAAATTACCAAGACCCAACCCATCACAACCTCGTCGTCGTCTTCGTCCTTGTCGTTTCAGCTATCCCAACCTTCCCTTGACCAAAGAAAATCATATTATTTCACTAGAGAACTAACCGAACCTGTACCTGACCCTACCCGTATTCTCGACCCCCCAAGAAAATCCACCAAGAAAAAAAAACCAACTTCCCCAAATCGCCGACAATTAAAATCTCTGGCAGCTGAATGCAGCTGCCAGAAATTAAAGTTGCAGGAGGTCAACTTTGACGAAAGCACGTCGCCAGTACAATCCTGTACTTGCACGTGCAAAAGTAATTTGTCAGAAGACGTCTTTTACAGGAAAGTTGACCTCCCGCCGATAATAACAAAACCCGAAAAGGAAAACGAATTCGGGTCGGGTAAATGGGTTATAGACGGAGCGAGCCGGAGTTTATCGGTTCGGGTTGTGAAGGAGGGTAATATTGGAAGCCCGGTGAGAAAACCGAAACCGAACGGTTACTCGCCGAGGTTAGGGAACCGGGTTCGGGTTAACGGGTTGAATCGGAGGAGAAGTGGGACCCGGAGAAGCTTATCGGAAAGTTTGGCGGTTGTGAAGACATCAATGGACCCGGGTAGGGATTTTAAGGAGTCAATGGTGGAGATGATAATGGAGAATAATATTAAGAGTTCTAAGGATTTGGAAGATCTTCTTGCATGTTATCTTGCATTGAATTCGGATGAGTATCATGACTTGATCATCAAGGTATTCAAACAAATTTGGTTTGAGAGTACTGATATTAGACTGTAG 843 44.25 MIIMGNYKFRFSWFHSSNKKITKTQPITTSSSSSSLSFQLSQPSLDQRKSYYFTRELTEPVPDPTRILDPPRKSTKKKKPTSPNRRQLKSLAAECSCQKLKLQEVNFDESTSPVQSCTCTCKSNLSEDVFYRKVDLPPIITKPEKENEFGSGKWVIDGASRSLSVRVVKEGNIGSPVRKPKPNGYSPRLGNRVRVNGLNRRRSGTRRSLSESLAVVKTSMDPGRDFKESMVEMIMENNIKSSKDLEDLLACYLALNSDEYHDLIIKVFKQIWFESTDIRL 280
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00836 280 ProSiteProfiles OVATE domain profile. 215 274 IPR006458 -
Bial22g00836 280 NCBIfam uncharacterized plant-specific domain TIGR01568 214 273 IPR006458 -
Bial22g00836 280 MobiDBLite consensus disorder prediction 61 87 - -
Bial22g00836 280 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 50 274 IPR038933 GO:0045892(InterPro)
Bial22g00836 280 Pfam Transcriptional repressor, ovate 219 274 IPR006458 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00836 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182204 Bial10g01243 Bial22g00836
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
707263 Bial Bial22g00836 Bial-Chr22:8018545 Bial5g00678 Bial-Chr5:9651989
782134 Bial Bial10g01243 Bial-Chr10:12437520 Bial22g00836 Bial-Chr22:8018545
818015 Bial Bial17g00511 Bial-Chr17:7690950 Bial22g00836 Bial-Chr22:8018545
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Bial Ovate 8.5e-24 No_clan TF OFP