AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00858 ATGAATAAGTTGGAGAACTTCGATGTGGAGGAGAGAAGGAGACGCATTCTCTCACTACAACTACATTTATTATTATTATTATTATTATTATTATTATTATTCTTTCTTTCACCTGTAAACTCATTTCCTCCATTGAAACCACCGGCCGCCGCAATCAATCATATTATACTGCCACCTCTCCGATCCATCAAACTCTCTACAGGCGATCACATTCACAATAATAATAATAACATGTCTGCTGGTGCTCAGCTTCATCAATCTCCGGTTACCCGAAACAACCGTTATTCGAATCCCACTAGACATATACATATACCTAACCTTGGATTACCAAACCCCACCTGCCCAAAACTCGTCGATTTCTCCGCTTTGGGATTGTCTCTCAGATTAAAGCCCGATTTATTATCTAACCGACACGCGGTCCCCTGCGCTGGCGGTGATGGTGGTAGTTCCGGTATCGGTCACGGCAGCGGCGGTGGTGGTGACGGTGGAAGTGGCGACTGGAGCCGAGACGGGGGAAAGTCGGATGACTCGTCGTCGTTAGATAGTTTCGGTCCGATTGGGGCTTTTCTTAGCGGTTGGAGATCTCGGGTTGCTGCGGATCCTCAGTTTCCGTTCAAGGTGTTGATGGAAGAAGTTGTTGGTGTGAGTGCGAATGTGTTCGGTGACATGGCGACTCGTCCGAACTTCGGTTTGAACGAGCTCGATTTCGTGTTCTCGACACTTGTAGTCGGGTCGATAATGAATTTCACTTTAATGTACTTATTAGCCCCAACCATGACTTCCGGCTCAGCCACACTTCCTTTCATATTCGCCAACTCACCACCGAGCCACATGTTTGAGTCGGGCGCGTACACCCTGGTTGACCGGCTAGGCACGTTTGTTTACAAAGGAACCGTGTTTGCAGCCGTGGGTTTTGCAGCTGGATTAGTAGGAACCGCATTGTCAAACGGTTTGATCAAGATGCGGAAGAAGATGGACCCGAGTTTTGAGTCACCGAACAAGGCCCCACCCACGGTTTTGAACGCGGTCACGTGGGCGATTCATATGGGTATAAGTAGTAATTTGAGGTACCAAAGTTTGAATGGGGTTGAGTTTATGTTGGCTAAGGGGTTGTCACCGTTGTTGTTCAAGAGCTCGGTGATCGGGTTGAGGTTGGTGAATAATATTCTTGGCGGGATGACGTTTGTGATGTTGGCGAGGTTGACCGGTTCGCAGAGCGCGGGTGGAGAAGAGGACAAGGTTGGTTATGAAGAGAGTTCAGATGAGGAGAAGAAGTTGTTGGGTGATGAAATTGCATCAAGGTAA 1305 47.82 MNKLENFDVEERRRRILSLQLHLLLLLLLLLLLFFLSPVNSFPPLKPPAAAINHIILPPLRSIKLSTGDHIHNNNNNMSAGAQLHQSPVTRNNRYSNPTRHIHIPNLGLPNPTCPKLVDFSALGLSLRLKPDLLSNRHAVPCAGGDGGSSGIGHGSGGGGDGGSGDWSRDGGKSDDSSSLDSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVFGDMATRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTMTSGSATLPFIFANSPPSHMFESGAYTLVDRLGTFVYKGTVFAAVGFAAGLVGTALSNGLIKMRKKMDPSFESPNKAPPTVLNAVTWAIHMGISSNLRYQSLNGVEFMLAKGLSPLLFKSSVIGLRLVNNILGGMTFVMLARLTGSQSAGGEEDKVGYEESSDEEKKLLGDEIASR 434
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00858 434 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 125 407 - -
Bial22g00858 434 MobiDBLite consensus disorder prediction 144 179 - -
Bial22g00858 434 MobiDBLite consensus disorder prediction 411 434 - -
Bial22g00858 434 MobiDBLite consensus disorder prediction 405 434 - -
Bial22g00858 434 Pfam Protein RETICULATA-related 196 363 IPR021825 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00858 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182216 Bial10g01267 Bial22g00858
363599 Bial12g02715 Bial22g00858
374160 Bial22g00858 Bial24g02558
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr21:23248799 Bial22g00858 Bial-Chr22:8244263 dispersed
Bial Bial-Chr22:8244263 Bial9g01383 Bial-Chr9:23059711 dispersed
Bial Bial-Chr10:12671930 Bial22g00858 Bial-Chr22:8244263 wgd
Bial Bial-Chr12:57349410 Bial22g00858 Bial-Chr22:8244263 wgd
Bial Bial-Chr22:8244263 Bial24g02558 Bial-Chr24:56452316 wgd