AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00871 ATGGCGCTTAAACACCATCATCATAACTTGTTCTTCTTGATCTTCATCCTGTTGACGATAATTGACACGGCTACACTTCTCGTCTCCGCCGATGCGATCCAAGGCTGCGGTGGTTTCGTCGAGGCGACTTCGTCTTTGATCAAGTCAAGGAAGCCCACCGATTCCAAATTGGACTATTCGCATATCACGGTTGAGCTGCGAACTTTGGATGGCTTGGTGAAGGATCGGACACAATGTGCTCCTAATGGTTACTACTTCATCCCTGTTTATGATAAGGGTTCTTTTGTTATCAAAGTCAAAGGACCAGAAGGATGGTCATGGAATCCAGATCAGGTTCCTGTGCTTGTTGATCATACTGGCTGTAATCGCAACGAGGATATAAACTTTCGGTTTACAGGATTCACTATTAATGGAAAAGTTGTGGGAGCAGTTGGTGGTCCGAGTTGTTCATCTAAAAATGGCGGTCCATCAAATGTAAAAGTTGACCTTTTAGATTCAAACGGGAATATAGTATCTTCTGCGAAAACATCAGTGTCTGGAAGTTACTCTTTCACCAATATTATTCCAGGACAATATACTCTACGCGCATCCCATGAAGACTTGAATATTGAAGTCAAGGGTTCAACAGAGGTTGAATTGGGGTTTGGAAATATTCAAGTTGACGATGTCTTTTTTGTCTCTGGTTATGATATTCGTGGATTGGTAGTTGCACAGGGAAATCCTATTTTGGGGGTTCACTTTTATCTGTACTCTGATGATGTTAAAGAAGTCAACTGCCCACACGGTTCTGGTAACCCGTCTGGTGATAGAACTGCACTTTGTCATGCAATATCTGATGTTGATGGAAAGTTTACTTTCAAGTCAATTCCATGCGGTGTTTATGAGCTTATACCTTATTATAAGGGTGAAAATACAGTTTTTGATGTTTCACCTCCCTCTGCCACTGTAACTGTTCAACATGATCATGCAACCATTTCTGAAAAGTTTCAGGTTACTGGTTTTTCTGTTGGCGGTCGTGTTGTTGATTCTGAAGGCAAAGGAGTCGATGGTGTAAAAATTGTGGTGGATGGTGTTGAGAGGTCTGTCACTGATAAACAAGGATATTATAAGCTTGATCAGGTTACGTCTAAACAATATCTGATTGAAGCGAAAAAGGAGCACTACAAGTTTGACAAATTGACCGACTTCATGGTTTTACCAAATATGGCATCGGTTGCTGATATCAAAGCAGTGTCTTATGATGTTTGTGGCTCAGTGCATACAGTTGATTCTGGTTACAAAGCAAAAGTGGCTCTGACTCATGGACCAGATAACGTTAAGCCACAAATGAAACAAACTGATGATAATGGCTATTTCTGCTTTGAGGTTCTACCTGGTGACTACCGGTTATCGGCTATTGCAGTCGCACCTGAAACTGCCCCGCATCTTCTATTCTCGCCACAGCATATTGATGTCAATGTCAATGGTCCATTGCTGTCACTGAAATTTTATCAGGCACAAGTTAATGTAGGCGGCTCGGTTACTTGCAAAGAAAAATGTGACTCATCTGTTTTTGTTGATCTTGTAAAATTGGATGCTAAAAGCAATGAAGAAAGACAGACAGTAGGCTTGACTGGTCAAAGTAGTGAATTTTTATTTCAAAATGTCCTACCGGGAAAATATAAGCTTCAGATCAAGCATGTTTCTAAAGAAGCTAAATCCGGAGAAGATAACTGGTGTTGGGAACAAAGCTCGGTTCTTCTTAATGTTGGAATAGAAGATGTTAACGGGATTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCCACTCACAAGGTAGATGCGTATCTGCATCAATCAGATGGGTCCCGTGTGGATCTGAAAATTAAGAAAGGTTCGCAGCGCATATGCATTGAATCACCCGGAGTGCACGAACTTCACTTCGTAAACTCGTGTATACTTTTTGGAACCTCACCTGTGAAAATCGACACTGCTAATACTTCGCCTATTTATCTGAAAGGAGAGAAATATCTCCTCCAAGGAGAAATTAAGGTTGAGTTGACCTCACAGCATGGTGTCCATCACTTGCCTAAAAATCTAGTGGTTGACATCTTGAATGATGAAGGAACCGTTATCGATGGCACTACTGCGAAATATGTTAATGAAAACGAACACTCAAATACAGCTCTTTATAAATATGAAGTATGGGCAAATCCTGGAGAAAAACTTACATTTGCGCCTCGGGATATTCGGAGTGAAAACGAGAAAAAGATTTTGTTTTATCCTAGACAACATCAGGTCAAAGTGGCACAAGATGGCTGTCAAGCTTCGGTTCCTCTGTTTTCTGGACGACTCGGATTGTACATTGAAGGATCGGTTTCACCTCCACTTCCCGATGTTACTATCAGAATCATAGCTTCTGGAGATAGTCAAAATGGTCAAATCAAGAAAAATGAGTTGGCATTTGAAACAACTACAAACGCAGATGGGTTGTTCATTGGTGGGCCCCTTTATGATGACATCACTTACCTTACCCAAGCTTCAAAGCCCGGTTATCATGTAAAGAAAATCGGACCGAATTCCTTTTCGTGTCAAAAGCTCGGTCAAATTTCGGTGCATATACATTCTAAAGAAGATTCCAGTGATTTATTCCCCTCGGTATTATTATCGTTAAGCGGGGAAGATGGTTATAGAAATAACTCGATATCTGCTGCTGGTGGAACTTTCGTGTTTGATAACTTATTTCCCGGAAGTTTTTATCTCCGTCCTCTCTTAAAGGAGTATGCTTTCTCACCATCTGCACAAGCAGTTGAACTTGGTTCTGGGGAGTCAACAAAAGTTGTATTTCATGCCACACGTGTTGCTTACAGCGCGATGGGTGTGGTTACTCTGTTATCCGGTCTACCAAAAGAAGGCGTTTCAGTCGAGGCCCGTTCCGACTCAAAAGGTTATTACGAGGAAACCGTCACAGACTCATTAGGAAATTACCGCCTACGTGGACTTCACCCCGATACAACTTACACGATTAAAATAGCAAAAATAAACGGGTTTGGTACGTCTAACATCGAACGCGCTTCTCCAGCATCTGTTGAAGTCAATGTTGGATATGAAGACATAAAGGGATTAGACTTTTTGGTATTTGAGCAACCGGAAATAACGTTATTAACTGGAACGGTTCAAGGAAGTGGAAATAAGGAGGTTTATGAACACCTAAAGTTGGAAATTAGATCGGCTAGTGATCCGTCCAGTATCGAGTCATTGTTACCTTTGTCAATTTCAAACTTCTTCCAGGTGAAGGGTTTGCCAAGGGGCAAGCATCTGCTGCAGCTGCGGTCAACACTAACACCGCGTACCCTCAGATTTGAATCGGAAGTGATCGAGGTTGATTTGGAGAAGAATACCCAAGTTCATGTGGGTCCCTTGACATTCAAAGTTGAAGATGATCACCATAAACAGGAATTGACTCCGGCACCTGTGTATCCGCTTATTATTGGAGTATCGGTTATTGCATTATTCATCAGCATGCCAAGATTGAAAGACATGTACCAAAGCAATGCAGGAGCTCAGGGACCCAGTGCATCGACGTGGGTCCCAGTAACGAAGAAAACCGTGCGAAAAAAGACTTACTAG 3615 41.72 MALKHHHHNLFFLIFILLTIIDTATLLVSADAIQGCGGFVEATSSLIKSRKPTDSKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFVIKVKGPEGWSWNPDQVPVLVDHTGCNRNEDINFRFTGFTINGKVVGAVGGPSCSSKNGGPSNVKVDLLDSNGNIVSSAKTSVSGSYSFTNIIPGQYTLRASHEDLNIEVKGSTEVELGFGNIQVDDVFFVSGYDIRGLVVAQGNPILGVHFYLYSDDVKEVNCPHGSGNPSGDRTALCHAISDVDGKFTFKSIPCGVYELIPYYKGENTVFDVSPPSATVTVQHDHATISEKFQVTGFSVGGRVVDSEGKGVDGVKIVVDGVERSVTDKQGYYKLDQVTSKQYLIEAKKEHYKFDKLTDFMVLPNMASVADIKAVSYDVCGSVHTVDSGYKAKVALTHGPDNVKPQMKQTDDNGYFCFEVLPGDYRLSAIAVAPETAPHLLFSPQHIDVNVNGPLLSLKFYQAQVNVGGSVTCKEKCDSSVFVDLVKLDAKSNEERQTVGLTGQSSEFLFQNVLPGKYKLQIKHVSKEAKSGEDNWCWEQSSVLLNVGIEDVNGINFVQKGYWVNLVSTHKVDAYLHQSDGSRVDLKIKKGSQRICIESPGVHELHFVNSCILFGTSPVKIDTANTSPIYLKGEKYLLQGEIKVELTSQHGVHHLPKNLVVDILNDEGTVIDGTTAKYVNENEHSNTALYKYEVWANPGEKLTFAPRDIRSENEKKILFYPRQHQVKVAQDGCQASVPLFSGRLGLYIEGSVSPPLPDVTIRIIASGDSQNGQIKKNELAFETTTNADGLFIGGPLYDDITYLTQASKPGYHVKKIGPNSFSCQKLGQISVHIHSKEDSSDLFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTKVVFHATRVAYSAMGVVTLLSGLPKEGVSVEARSDSKGYYEETVTDSLGNYRLRGLHPDTTYTIKIAKINGFGTSNIERASPASVEVNVGYEDIKGLDFLVFEQPEITLLTGTVQGSGNKEVYEHLKLEIRSASDPSSIESLLPLSISNFFQVKGLPRGKHLLQLRSTLTPRTLRFESEVIEVDLEKNTQVHVGPLTFKVEDDHHKQELTPAPVYPLIIGVSVIALFISMPRLKDMYQSNAGAQGPSASTWVPVTKKTVRKKTY 1204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00871 1204 Gene3D - 336 416 - -
Bial22g00871 1204 Pfam SdrD B-like domain 154 198 IPR033764 -
Bial22g00871 1204 Gene3D Immunoglobulins 150 223 IPR013783 -
Bial22g00871 1204 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 53 129 IPR055075 -
Bial22g00871 1204 Pfam Carboxypeptidase regulatory-like domain 335 408 - -
Bial22g00871 1204 SUPERFAMILY Hypothetical protein PA1324 121 201 - -
Bial22g00871 1204 SUPERFAMILY Cna protein B-type domain 876 936 - -
Bial22g00871 1204 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 32 1185 IPR051417 GO:0005789(PANTHER)
Bial22g00871 1204 FunFam Carbohydrate-binding-like fold 150 222 - -
Bial22g00871 1204 SUPERFAMILY Carboxypeptidase regulatory domain-like 335 429 IPR008969 -
Bial22g00871 1204 SUPERFAMILY Cna protein B-type domain 955 1024 - -
Bial22g00871 1204 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 781 853 IPR055073 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00871 K26500 BOS complex subunit NOMO
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Event-related genes

Select Gene_1 Gene_2 Event_name
182223 Bial10g01278 Bial22g00871
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
751927 Bial Bial22g00871 Bial-Chr22:8343961 Bial10g01278 Bial-Chr10:12779538