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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00882 ATGAGCCGAAGAGCGTGGCGGATATTACGGTTAGCCTTGTTATGGGCTAGAAAAGGTGGAGTGATCAAGAAAAGGTTTATGCTAGACTTGTCTCATTATCTCAAGACTCTTGGCCAATCCAAAAAGGGCAATGGTGCATTACAATATGGTGACCGGCAGCTATCGTTTGATGCGACGCCTATTATTCATGTTAGGATGCATAGGCCGAACTCCATGAGGTTTCGGTTGCCTCACATTCCTTGCATTAATCCGCATGTTGATTGTAAGGATATGTTTGATTTTGATGATGAGAGTGATCGGTACTCGTGTTATGAAGCAAGAAATAGTTTCTTGATCGGAAATGGCGAAGAATATTATGATGATGAGGAAATATGTGAGGAACAAGAAATGGGGATAGATATAAAGGCTCAAGAGTTTATAGACAACTTTTATGAGCAGCTTAAGCTTCAAAGGCAACATAACACCAAAAGAATATGTCACTAA 483 40.37 MSRRAWRILRLALLWARKGGVIKKRFMLDLSHYLKTLGQSKKGNGALQYGDRQLSFDATPIIHVRMHRPNSMRFRLPHIPCINPHVDCKDMFDFDDESDRYSCYEARNSFLIGNGEEYYDDEEICEEQEMGIDIKAQEFIDNFYEQLKLQRQHNTKRICH 160
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00882 160 Pfam Cotton fibre expressed protein 132 158 IPR008480 -
Bial22g00882 160 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 2 154 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00882 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182229 Bial10g01288 Bial22g00882
363612 Bial12g02731 Bial22g00882
374165 Bial22g00882 Bial24g02578
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
671093 Bial Bial10g01287 Bial-Chr10:12851078 Bial22g00882 Bial-Chr22:8408292
671094 Bial Bial10g01288 Bial-Chr10:12854373 Bial22g00882 Bial-Chr22:8408292
677951 Bial Bial12g02731 Bial-Chr12:57477448 Bial22g00882 Bial-Chr22:8408292
707299 Bial Bial22g00882 Bial-Chr22:8408292 Bial24g02578 Bial-Chr24:56610515
742801 Bial Bial22g00881 Bial-Chr22:8405015 Bial22g00882 Bial-Chr22:8408292