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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00884 ATGGACGGAGCCTACAACCACCCACCACCCAATTTCCACTACCAAACCGACCGCCGCCTGGAGATTGTTAGCGGCAAGGGCGGTAACCAAGTATACGCCGCCGCCGCCGGAGTTGATTATCCTCCGGCGAGGACGTCGACGTCGACGTCGAAGCCGTGGGGAGGGTTTAGTGATCCGGAGAGTAAGCGGAAGAAGAGGATTGCTAAGTATAAAGTGTACACCATTGAAGGTAGGGTTAAGGCTTCCTTTAGGAATGGTATTCGTTGGATTAAATCCAAGTGCTCCGATTTCATCCATGGGATTTGA 306 52.61 MDGAYNHPPPNFHYQTDRRLEIVSGKGGNQVYAAAAGVDYPPARTSTSTSKPWGGFSDPESKRKKRIAKYKVYTIEGRVKASFRNGIRWIKSKCSDFIHGI 101
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00884 101 Pfam Domain of unknown function (DUF3511) 56 100 IPR021899 -
Bial22g00884 101 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 42 100 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00884 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182230 Bial10g01290 Bial22g00884
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr22:8414555 Bial3g00793 Bial-Chr3:24327075 dispersed
Bial Bial-Chr10:12860556 Bial22g00884 Bial-Chr22:8414555 wgd