AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00894 ATGGAATCATATGCTACGAGATTCACTTTTATTGTTCTTCTCTTGTCGGTGATCACGATACTTGCTTCGGCTGACAGTGAATATGGAAAATCACAGGATTATGAAAAAGCTAGTCCTAAGTTACCAACAAAGTCCGTGATACCAAAGGAGGAACACGGGGCTTATGAGAAGACCGGTCCCAAGTTGCCAACAATACCCGTAATACCAAAGGAAGAGCATGGAACATACGAGAAGCCCAATCCAAAGTTACCAACAAAGCCCGTGATACCAAAGGAAGAGCATGGAGCGTATGAGGAGCCCAAGCCAAAATTACCAACAAAGCCCATGACACCAAAGGAAGAGCATGGAGCGTACGAGGAGCCCAAGCCAAAGTTACCAACAAAGCCCGTGATACCAAAGGGAGAGCATGGAGCATATGAGGAGCCCAAGCCAAAGTTACCAACAAAGCCCGTGATACCAAAGGAAGAACATGGAGTGTACGAGGAGCCCAAGCCAAAGTTACCAACAAAGCCTGTGATACCAAAAGAGGAGCACGAGGCTTATGAGAAGACCGGTCCTAAGTTGCCAACATTACCCGTGATACCAAAACCGGACCAAGAAAGCTATGAGAAAAACTATCCTAAGGTACCTAAGGTGCCAGAGCACCCGAAGAACATAGCCGTTCAAGGTCTTATTTATTGTAAATATGGTTCCAAACTCCTCCCAATTCAAGGAGCGACTGCCAGAGTGACTTGTTTGGCAGTACACAAGAATGGATATGAATCCGCGCCATTTTCATTCTCAAGTTGTCCAGCAGACGAAAAGGGTTACTTTTTGGCTAAATTACCATCATCGACGCTTGTGAAGGACGATCTATGGGAAATCACAGAGTGCAAGGCTTTCCTTGAAAACTCGCCATGGACAAGTTGCATGGTTCCAGAAGATACAAACGGAGGAATTACAGGTGTTCGCGTTACATTTTCTCGTCATCTAACCAACAACGGATATTGTTTGTCATCGGTTGGCCCGTTTATATACAATCCGGGACATGAGGCACTACCCAAAGAAGGTTACTAG 1056 45.55 MESYATRFTFIVLLLSVITILASADSEYGKSQDYEKASPKLPTKSVIPKEEHGAYEKTGPKLPTIPVIPKEEHGTYEKPNPKLPTKPVIPKEEHGAYEEPKPKLPTKPMTPKEEHGAYEEPKPKLPTKPVIPKGEHGAYEEPKPKLPTKPVIPKEEHGVYEEPKPKLPTKPVIPKEEHEAYEKTGPKLPTLPVIPKPDQESYEKNYPKVPKVPEHPKNIAVQGLIYCKYGSKLLPIQGATARVTCLAVHKNGYESAPFSFSSCPADEKGYFLAKLPSSTLVKDDLWEITECKAFLENSPWTSCMVPEDTNGGITGVRVTFSRHLTNNGYCLSSVGPFIYNPGHEALPKEGY 351
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00894 351 Pfam Pollen protein Ole e 1 like 221 315 - -
Bial22g00894 351 MobiDBLite consensus disorder prediction 134 151 - -
Bial22g00894 351 PANTHER OS01G0164075 PROTEIN 11 343 - GO:0071944(PANTHER)
Bial22g00894 351 MobiDBLite consensus disorder prediction 28 151 - -
Bial22g00894 351 MobiDBLite consensus disorder prediction 87 122 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00894 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
182239 Bial10g01300 Bial22g00894
363618 Bial12g02736 Bial22g00894
374168 Bial22g00894 Bial24g02582
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
671101 Bial Bial10g01299 Bial-Chr10:12931496 Bial22g00894 Bial-Chr22:8527544
671102 Bial Bial10g01300 Bial-Chr10:12935619 Bial22g00894 Bial-Chr22:8527544
677956 Bial Bial12g02736 Bial-Chr12:57504280 Bial22g00894 Bial-Chr22:8527544
707307 Bial Bial22g00894 Bial-Chr22:8527544 Bial24g02582 Bial-Chr24:56630721
742803 Bial Bial22g00893 Bial-Chr22:8522980 Bial22g00894 Bial-Chr22:8527544