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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00907 ATGGCGAACACGGAAACGGAACAGAAACCGGTGATGGTAGTCGGCATCGATGACAGCGATCACAGTTTTTACGCACTGGAATGGACTCTCGATCACTTTCTAGTGCCTTCTGCTCCTAATACTCCATTCAAGCTGATAGTTGTTCATTCCAAGCCTTCTCCGACTTCAGCTATCGGTTTCGCTGGTCCAGATGATTTCTCGATGCAGGTGAATGATGTGAAGGTTGAAGTTGTGGAAGGCGATGCCAGAAATGTTCTATGTGAAGCTGTAGAGAGGCATCATGCTACCATGCTGGTAGTCGGTAGCCATGGTTATGGAGCAATTAAAAGGGCGGTTTTGGGGAGTGTAAGTGACTATGTTACTCATCATGCCCATTGCACTGTGATGATTGTGAAGAAGCCAAAGACCAAACACTCGGGTTAG 423 47.04 MANTETEQKPVMVVGIDDSDHSFYALEWTLDHFLVPSAPNTPFKLIVVHSKPSPTSAIGFAGPDDFSMQVNDVKVEVVEGDARNVLCEAVERHHATMLVVGSHGYGAIKRAVLGSVSDYVTHHAHCTVMIVKKPKTKHSG 140
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00907 140 PRINTS Universal stress protein signature 92 104 IPR006015 -
Bial22g00907 140 PRINTS Universal stress protein signature 110 132 IPR006015 -
Bial22g00907 140 PRINTS Universal stress protein signature 9 27 IPR006015 -
Bial22g00907 140 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 134 - -
Bial22g00907 140 Pfam Universal stress protein family 69 132 IPR006016 -
Bial22g00907 140 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 64 - -
Bial22g00907 140 Gene3D HUPs 64 139 IPR014729 -
Bial22g00907 140 CDD USP-Like 12 131 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00907 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
28298 Bial17g00132 Bial22g00907
31792 Bial22g00907 Bial5g01054
182246 Bial10g01316 Bial22g00907
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr17:3128367 Bial22g00907 Bial-Chr22:8649231 dispersed
Bial Bial-Chr22:8649231 Bial5g01054 Bial-Chr5:15162517 dispersed
Bial Bial-Chr10:13090705 Bial22g00907 Bial-Chr22:8649231 wgd