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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00914 ATGACAACTTCTTTAACCAATCTTCTTATTATTACACTGATTATCTCCGCCGTGTTTTTGCCTCCGGCAGCCGCCGGAATCGCTGACTTCAACTGGCTGCCGTCGCAAGGCGGAGAGTGCAGCGGGTCGATCGGCGAGTGTATGACCGACGGAGGAGAGCTGGAGATGGAGTCTGAGAGCACCAGGCGTATTTTAGCCACGACTAGGTATATCAGCTATGGTGCGCTGCAAGGGAACAATGTGCCGTGCTCGCAAAGAGGTGCGTCGTATTATAATTGTCGGTCTGGTGGTCAAGCCAACCCGTACCAGCGTGGCTGCAGTACTATTACTCGTTGCAGACGTTGA 345 53.04 MTTSLTNLLIITLIISAVFLPPAAAGIADFNWLPSQGGECSGSIGECMTDGGELEMESESTRRILATTRYISYGALQGNNVPCSQRGASYYNCRSGGQANPYQRGCSTITRCRR 114
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00914 114 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 9 114 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
Bial22g00914 114 Pfam Rapid ALkalinization Factor (RALF) 53 114 IPR008801 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00914 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182250 Bial10g01323 Bial22g00914
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr15:66615027 Bial22g00914 Bial-Chr22:8780943 dispersed
Bial Bial-Chr22:8780943 Bial24g02186 Bial-Chr24:52396557 dispersed
Bial Bial-Chr10:13205426 Bial22g00914 Bial-Chr22:8780943 wgd
Bial Bial-Chr22:8780943 Bial4g00876 Bial-Chr4:10919861 wgd