AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00958 ATGAAACTCAACGTCACGTGGTCGTCTGCTGCTCGCGCCTCTTTCCTTATTATTCTTCTCGGTGCTTTTGCCTTTGCGTGTTTCAGCCTTCCGATTGAAAAGATTTTGAAGAACTTTTTGCTGTGGATTAAGGAAGAGTTAGGGCCTTGGGGTCCACTTGTTCTTGCCATTGCTTATATTCCTCTTACAGTGTTTGCAGTTCCAGCGTCAATACTTACGCTTGGAGGGGGATATCTCTTTGGATTGCCTGTAGGATTTGTTGCTGATTCAATCGGTGCAACCCTTGGTGCAACAGCTGCTTTTCTTGTTGGCAAAACGATTGGGCGATCTTATGTCATTTCTAAGTTAAAGAAATATCCAAAGTTTCAGGCTATAGCTATTGCAATACAAAGATCTGGCTTTAAGATTGTTTTGCTTCTTCGTTTTGTTCCATTGCTTCCATTTAACGTGTTGAATTACCTGTTATCTGTTACTCCTGTCCCCTTATGGGAGTATATGTTGGCCACTTGGATCGGGATGATGCCAATTACATTCTTTTTTGTTTATATTGGAACAACCCTCAAGGATATTTCTGATGTTACACATGGATGGCATGGAATATCAAAAACCCGCTGGATGTTTATGGCTTTTGGGCTTACAATATCAGTGACGTTGATAGTTTACATCATCAAAGTTGCAAAAGCTTCTCTAGAAAAAGCACTGGCTGAAAATGGTGAGATAGACAGCATCGATTTGGACTCACCCGGGCTGCCTATTATAGCTGACTCAACACTGGGTCTCCATAGACCTTTGATAGTTACAGTGGACTCAACTGTAGACGATCTTGTTTGA 831 41.64 MKLNVTWSSAARASFLIILLGAFAFACFSLPIEKILKNFLLWIKEELGPWGPLVLAIAYIPLTVFAVPASILTLGGGYLFGLPVGFVADSIGATLGATAAFLVGKTIGRSYVISKLKKYPKFQAIAIAIQRSGFKIVLLLRFVPLLPFNVLNYLLSVTPVPLWEYMLATWIGMMPITFFFVYIGTTLKDISDVTHGWHGISKTRWMFMAFGLTISVTLIVYIIKVAKASLEKALAENGEIDSIDLDSPGLPIIADSTLGLHRPLIVTVDSTVDDLV 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00958 276 Pfam VTT domain 67 185 IPR032816 -
Bial22g00958 276 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Bial22g00958 276 PANTHER UNCHARACTERIZED 6 255 IPR015414 GO:0016020(InterPro)|GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00958 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr14:65692204 Bial22g00958 Bial-Chr22:9230807 dispersed
Bial Bial-Chr22:9230807 Bial6g03108 Bial-Chr6:75593338 dispersed
Bial Bial-Chr10:13645113 Bial22g00958 Bial-Chr22:9230807 wgd