AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00969 ATGCAGCCCAGTTGGGAAGATAAACGTAAAACTGAGGCGATCTATCCTCTACAGAAACCCAATAATAATAATCTTCTCAAATCAGTTCAATCATCAATGGATTTCTTCAGATCCATATTAGCAGACGATCCAGAACCCGAATCTCCATATAATCATGAGCAATCCGATACAAATCCGCGCCAAAATGAATCACCAGATCACCAAGAAGCCGAAGATGACGATTCCACTTCGAATATTAATTCATCGGAAGACGACGGCAGCGCTGGTGGTGCTAGTGGTGGTTTATGGAGCTTCGGAGATCTAGTGAAAACTTTGACTACGAAATCGGAATCAGTATTGGAAACATACCGTCGAGATCTCAAGGAATTCGGTACTGGTTTGCGAAAGGAATCCGATTTATTCCGTGAAGTTGCGAGCCGTGCAGTGAAGGAGTTGCCGGCGTCCATTGACGTCGGCACGTCGGCGATTGACGGAGTGTTGAAATCGACAGCGGATATTATTTCACAAGGTAAAGAAGCTTTGCTTGCACCTTCTTCTGATGTTGATGATTATAGTGATCGGAGTGTGGGTTCGATGAGGTACAATCGGTTTGATGCGCAATTGAATGTTATTAGGAGTGATGTGAGGGTTTACTGTGAGGATCCTGAGGATGTGGAGGATTATAATAAGTGGAAGGTTGGGTTTGCGGTTGGGGATAAGAAGGATGAGATTGAGGAGTTGGTTGGAGAGAATGGTGAGTTGGTGGGGATGTATGAGAAGCTTGTGCCGAACGAGGTTGATGATGCGACATTTTGGTTTAGGTATTTTTACAGGGTGTGGAAGCTTAAGCAGCAGGAGGAGACGAGAGCGAAGCTTGTGAAGAGGTCTTTGTCGGCTGATGATGAAGAAGAGTTAAGTTGGGATGTTGATGATGATGAAGATGATGATGAGGTTGAACAACAGCAACAGCAACAACAAGAAGTTGATAAAATCGGATCTAGTACCTCAAAAGGCCAAGATTCAGTTGATGTTAAAAAGATAGACAACGCTGATGATGAAACTAAAACTCAAAGCTCCAAGATCGTTGTCGAAGATAAGGAGATGACGACTGGTGTGGTTAGTGTTGATAAGAACGATGTAGAGTCTACTGTTAAGAAAGTTGAATCAGTACCAGAATCTGATGAAAAGGTTGATATCAAACTCGATTCAGGTGAAACTAAAGATAATAATAATGTCATGGTTAAGTCAGACGAATCATCAAATCAGGAGGATGAAGATCTTGAGTGGGATGAGATTGAAGATATTGAGAAACCGGATGACAAGAATGTTGTCTCTCATGGTGAGACAACAACCAAAGGTGACTTGCGTAAGCGGTTGAGTACTGTTGCAGATGATGATGACGAGGATTTGAGTTGGGATATTGAAGATGATGACGAGCCGTTAAAACCAGGTAATAAGTGA 1440 42.64 MQPSWEDKRKTEAIYPLQKPNNNNLLKSVQSSMDFFRSILADDPEPESPYNHEQSDTNPRQNESPDHQEAEDDDSTSNINSSEDDGSAGGASGGLWSFGDLVKTLTTKSESVLETYRRDLKEFGTGLRKESDLFREVASRAVKELPASIDVGTSAIDGVLKSTADIISQGKEALLAPSSDVDDYSDRSVGSMRYNRFDAQLNVIRSDVRVYCEDPEDVEDYNKWKVGFAVGDKKDEIEELVGENGELVGMYEKLVPNEVDDATFWFRYFYRVWKLKQQEETRAKLVKRSLSADDEEELSWDVDDDEDDDEVEQQQQQQQEVDKIGSSTSKGQDSVDVKKIDNADDETKTQSSKIVVEDKEMTTGVVSVDKNDVESTVKKVESVPESDEKVDIKLDSGETKDNNNVMVKSDESSNQEDEDLEWDEIEDIEKPDDKNVVSHGETTTKGDLRKRLSTVADDDDEDLSWDIEDDDEPLKPGNK 479
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00969 479 Gene3D BSD domain 185 286 IPR035925 -
Bial22g00969 479 MobiDBLite consensus disorder prediction 317 333 - -
Bial22g00969 479 MobiDBLite consensus disorder prediction 429 458 - -
Bial22g00969 479 MobiDBLite consensus disorder prediction 296 315 - -
Bial22g00969 479 SUPERFAMILY BSD domain-like 193 281 IPR035925 -
Bial22g00969 479 MobiDBLite consensus disorder prediction 372 398 - -
Bial22g00969 479 ProSiteProfiles BSD domain profile. 224 276 IPR005607 -
Bial22g00969 479 MobiDBLite consensus disorder prediction 59 74 - -
Bial22g00969 479 Pfam BSD domain 224 280 IPR005607 -
Bial22g00969 479 PANTHER SYNAPSE-ASSOCIATED PROTEIN 56 466 IPR051494 GO:0005737(PANTHER)
Bial22g00969 479 MobiDBLite consensus disorder prediction 1 92 - -
Bial22g00969 479 MobiDBLite consensus disorder prediction 334 355 - -
Bial22g00969 479 MobiDBLite consensus disorder prediction 414 428 - -
Bial22g00969 479 MobiDBLite consensus disorder prediction 16 35 - -
Bial22g00969 479 SMART wurzfinal6 224 276 IPR005607 -
Bial22g00969 479 MobiDBLite consensus disorder prediction 295 479 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00969 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
363660 Bial12g02776 Bial22g00969
374184 Bial22g00969 Bial24g02618
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr22:9385466 Bial9g00607 Bial-Chr9:6715399 dispersed
Bial Bial-Chr12:57816559 Bial22g00969 Bial-Chr22:9385466 wgd
Bial Bial-Chr22:9385466 Bial24g02618 Bial-Chr24:56941428 wgd