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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial22g00983 ATGGAAGCTTCAACAACCTCCGCTATTTGTTTTGGTATGGAATCCTTAGGGCTTGAAACTGACATCCCGAGCTCAAAAACGTACTATAACCTAGGATTGAAGCAAACATCTAAGCAAAACCATGGGAATCCTAAAGTTTTGTCACTTTTGTCATCAATTCTTGAGAGGTCGGTCCAAATGAACGAGACGTTACTCGATAAGGCACAAACGAAAGATGTAATAACGGTTTTTCATGGTTCAAGGGCGCCGGGACTCAGCATTAAAGAGTACATTGATAGAATATTCAAGTACTCGCACTGCAGCCCCTCGTGCTTCGTTGTCGCGCAAGTTTACATGGATCGGTTTATTCGGTGCGGAAATGTTAATTTGACTTCTTTAAGTGTGCATCGGCTTCTCATTACTAGTGTAATGCTTGCGGCCAAGTTCATTGATGACGCATTCTACAACAACGCTTATTATGCAAAAGTGGGAGGAGTAACAACAGCAGAAATGAACAGATTGGAGATGAAATTTCTATTTGGTTTGGACTTTCGGCTCCACGTCAGTGTCGGGACGTTTGGCAGATACTGTTCTCAATTGGAGAAACAAGTGTCATGTGAACTGCAAGTTGAAAGACCGCCACGGGTGATTCACGCCCCGTGTGGACTTAAAGAATCTTGGTCCAGTAGTGAAGACTCGAGTACGTACACTACAACAGAGATACATATCGTATAG 714 43.14 MEASTTSAICFGMESLGLETDIPSSKTYYNLGLKQTSKQNHGNPKVLSLLSSILERSVQMNETLLDKAQTKDVITVFHGSRAPGLSIKEYIDRIFKYSHCSPSCFVVAQVYMDRFIRCGNVNLTSLSVHRLLITSVMLAAKFIDDAFYNNAYYAKVGGVTTAEMNRLEMKFLFGLDFRLHVSVGTFGRYCSQLEKQVSCELQVERPPRVIHAPCGLKESWSSSEDSSTYTTTEIHIV 237
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial22g00983 237 PANTHER UNCHARACTERIZED 36 213 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Bial22g00983 237 Gene3D - 34 227 - -
Bial22g00983 237 Pfam Cyclin 65 179 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Bial22g00983 237 SUPERFAMILY Cyclin-like 89 180 IPR036915 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial22g00983 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
28308 Bial17g00215 Bial22g00983
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr14:46868221 Bial22g00983 Bial-Chr22:9613441 dispersed
Bial Bial-Chr17:4046964 Bial22g00983 Bial-Chr22:9613441 dispersed
Bial Bial-Chr22:9613441 Bial5g00977 Bial-Chr5:13986119 dispersed
Bial Bial-Chr10:13986180 Bial22g00983 Bial-Chr22:9613441 wgd