AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02164 ATGGATGCTAATCACAAGTACGCTAAAGAATTACAAGTCGGTGTACGGGTTGTTCAAATGGCTTGCTCTCTGTGTCAGAAGCTGCAAAAGGGTTCGGTGGGTCCCAACCCAGATCATGTCATCTCTAAAGACGACGATTCACCCGTCACTGTCGCTGATTGGAGTGTACAAGCAATGATCAGCTGGATGCTAACTGAATCATTCGGTCGAGAAAACGTCTCAATCGTAGCTGAAGAAGACACACAAAAACTAGCTGACGCCACCGCCACGTCTTTACTAGCATCCGTGGTTGCAACCGTGAACGAAACATTAGCCCTTGCACCCCGGTTCGGTCTCAAGGGTCCAGCCACACCTCTCAATGGTTCACAAGTTCTTGACGTCATTAGCCGATGCAACTCAACCGGTGGTCGGGTTGGAAGACACTGGGTCCTTGACCCTGTTGATGGAACCCTAGGGTTTGTGCGTGGAGACCAGTATGCGGTGGCTCTTGCGTTGATTGATAACGGTCAGGTTGTGGTTGGGGTTCTTGGGTGCCCTAATTATTCGAGTAAAAGGAAATTAGTTAATAATAATAGTAATTCGAGTTCGTTGGAATCGGAAGGCTGTGTTATGTACACAAGTAAGGGTAGTGGTCAAGCTTGGATGCAGCCACTGGTTCAGGATGATGGGTCTGAATGGCCCAGTTCGTCTAGTGTTATACGGGTTTCTAGTATTGATAACCCAGTAATGGCTACGTTTTGTGAACCAGTTGAAAAGGCTAACTCTAACCATTCGTATAGTGCGGGAATTGCTCACCGCGTAGGGCTTAGAAAACAACCATTGCGTGTTTATAGCATGGTAAAATATGCAGCAATCGCGCGTGGAGACGCAGAGATATACATGAAGTTTGCAAAAGCTGGATACAAAGAAAAGATATGGGACCATGCTGCTGGGGTGCTGATTGTGGAGGAAGCTGGCGGTGTTGTGACGGATGCTGGCGGCCGCCCACTGGATTTCTCAAAAGGGGTGTATCTTGAAGGCCTTGATCGAGGTATCGTTGCGTGTTCGGGTGTTAATTTACATGACAAAATTATAGGGGCTGTTTATGCAAGTTGGGATTCTTCTAATCTTTAA 1113 47.26 MDANHKYAKELQVGVRVVQMACSLCQKLQKGSVGPNPDHVISKDDDSPVTVADWSVQAMISWMLTESFGRENVSIVAEEDTQKLADATATSLLASVVATVNETLALAPRFGLKGPATPLNGSQVLDVISRCNSTGGRVGRHWVLDPVDGTLGFVRGDQYAVALALIDNGQVVVGVLGCPNYSSKRKLVNNNSNSSSLESEGCVMYTSKGSGQAWMQPLVQDDGSEWPSSSSVIRVSSIDNPVMATFCEPVEKANSNHSYSAGIAHRVGLRKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVLIVEEAGGVVTDAGGRPLDFSKGVYLEGLDRGIVACSGVNLHDKIIGAVYASWDSSNL 370
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02164 370 ProSitePatterns Inositol monophosphatase family signature 1. 142 155 IPR020583 -
Bial24g02164 370 PANTHER PHOSPHATASE 3 366 IPR051090 GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER)
Bial24g02164 370 Gene3D - 5 225 - -
Bial24g02164 370 FunFam PAP-specific phosphatase HAL2-like 234 367 - -
Bial24g02164 370 Gene3D - 234 364 - -
Bial24g02164 370 SUPERFAMILY Carbohydrate phosphatase 7 363 - -
Bial24g02164 370 Pfam Inositol monophosphatase family 46 361 IPR000760 -
Bial24g02164 370 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 7 369 IPR006239 GO:0006790(InterPro)|GO:0008441(InterPro)
Bial24g02164 370 CDD PAP-phosphatase 10 363 - -
Bial24g02164 370 ProSitePatterns Inositol monophosphatase family signature 2. 306 320 IPR020550 GO:0046854(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02164 K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
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Event-related genes

Select Gene_1 Gene_2 Event_name
184666 Bial12g02305 Bial24g02164
363304 Bial12g02305 Bial24g02164
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr11:54069947 Bial24g02164 Bial-Chr24:52215333 dispersed
Bial Bial-Chr18:20343461 Bial24g02164 Bial-Chr24:52215333 dispersed
Bial Bial-Chr23:46864523 Bial24g02164 Bial-Chr24:52215333 dispersed
Bial Bial-Chr24:52215333 Bial6g01140 Bial-Chr6:18501829 dispersed
Bial Bial-Chr12:53355128 Bial24g02164 Bial-Chr24:52215333 wgd