Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial24g02212 | ATGGCTGACCTCGAAACCCTAGGTATACTCGACGAGATTCAAGCACTCGTCTCCGATAACCTTCAAGTGGTTTCTTACAAGTGGTTGAGTAGGAATTTTTCTGTGCCATCAGATACTGCTAAGAGACTGCTTCAAGAGTTTGTGGAAAAGAATGGAAGTCAACTGGAAGTTATATATTCTTTATCTGGTTGGTTGAAAAATAACCCAGAAGCTTACCATGTTAGGCTTGTTTTGGGCTCTAAACTTTCAGAAATCAAACAAGAATTTGGTGATGGTTGTTCGGTTCAAGTTTACAGTGTCCAGTCTTCTGTTCCTAAAGACGCAGCAGTTATTTGGAATGCTGAATATGTGCAATCAGAAGAGCTATTCAAGGAGCCTGCAAATGTTGTTAACTGCTTGCGTGATAATCGGTTTTGTGGTGTTTCAAATTCATTTGTGAAACGCAACACAGAGGGGGCACCGGTTATAAACAGCGCAGCTCCACAGTTAAAAAGTGTAGGAGTGCACGCACAGTCAAAAACTAGTTCTGTTAATCAAGCTCTTGACACTTCACTTGGAAAAGAAAAAAAGACTGAGCAATTAAACCCTAAACCTAATCAAGCCATAAATGTCCAAAGTGGAACTCATAAAGAGCAAGTTCCTCAAAACAAAAAGAAATTACAAAATGATAAAACCTCCTCTGGGACTTCAAGCTCATTAGCTAGCATGTGGGGCCGTGCATCTGCAAAACCAAAACCCGAGTCTGCTTCAGTGAAAACCGAAACCATCGCTCCTATTTCTAATGATGCGCAGGTGCGTGCTAACGAGTCTGTAGAGGATGAAAGCAGTGATGATGGTGATGATAATCAACAAATGAACTTCAAACGAGCGTCTAATGGTGAAGGAAATAATAATAGAAAAAGACGGGTTGTGATGGACTACTCTGATGAAGATGATAATGTTGAAGATGCAGTGAATCTTGCATCACCAGATCCACCAAAAAAGCAAGTTTTGGTTCTTGATTCCAAGAAAAGTTCTACCATTTCAGGCCTTGAAAGTAAAAATTTGGATTTTGATGAAGAAAAAGAAGTAAAGAACGAAAAGGTGAACAAGATTGACCACAAGTCTGTAAACGAGAATAAACGTCCTCACGAAAATGAAGTTAAACAGGAAGATAAAACAAGCGATGCGGTTAAAAACACGAGTAAAAAGAGAAAAGTTTTGAAGACACGAATCGATGATCGTGGGAGAGAAGTAACCGAGGTGGTTTGGGAGGATGATGAGAAAGAAACAAAACATGATGACAATACAAGAAAGGATAAAGGTGACAATAATACCACAAACAATGCTGTTGTCAACAGGCCTGTTGCAGCAGCAGCTCCTAAGAAGTCACCTGCAGTATCAAATGCTACAGGCAAAGCAGGAAACAAGAAAACCAATGCTAAGGATCCTAAACAGGGGAATATCATGTCGTTTTTCAAAAAGAAGGTTTAA | 1473 | 39.71 | MADLETLGILDEIQALVSDNLQVVSYKWLSRNFSVPSDTAKRLLQEFVEKNGSQLEVIYSLSGWLKNNPEAYHVRLVLGSKLSEIKQEFGDGCSVQVYSVQSSVPKDAAVIWNAEYVQSEELFKEPANVVNCLRDNRFCGVSNSFVKRNTEGAPVINSAAPQLKSVGVHAQSKTSSVNQALDTSLGKEKKTEQLNPKPNQAINVQSGTHKEQVPQNKKKLQNDKTSSGTSSSLASMWGRASAKPKPESASVKTETIAPISNDAQVRANESVEDESSDDGDDNQQMNFKRASNGEGNNNRKRRVVMDYSDEDDNVEDAVNLASPDPPKKQVLVLDSKKSSTISGLESKNLDFDEEKEVKNEKVNKIDHKSVNENKRPHENEVKQEDKTSDAVKNTSKKRKVLKTRIDDRGREVTEVVWEDDEKETKHDDNTRKDKGDNNTTNNAVVNRPVAAAAPKKSPAVSNATGKAGNKKTNAKDPKQGNIMSFFKKKV | 490 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial24g02212 | 490 | MobiDBLite | consensus disorder prediction | 219 | 237 | - | - | |
| Bial24g02212 | 490 | MobiDBLite | consensus disorder prediction | 462 | 479 | - | - | |
| Bial24g02212 | 490 | Pfam | DNA polymerase subunit Cdc27 | 23 | 489 | IPR019038 | GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro) | |
| Bial24g02212 | 490 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 3 | 1 | 489 | IPR019038 | GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER) | |
| Bial24g02212 | 490 | FunFam | DNA polymerase delta subunit | 7 | 149 | - | - | |
| Bial24g02212 | 490 | MobiDBLite | consensus disorder prediction | 294 | 308 | - | - | |
| Bial24g02212 | 490 | MobiDBLite | consensus disorder prediction | 195 | 211 | - | - | |
| Bial24g02212 | 490 | Gene3D | DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 7 | 144 | IPR041913 | - | |
| Bial24g02212 | 490 | MobiDBLite | consensus disorder prediction | 347 | 435 | - | - | |
| Bial24g02212 | 490 | MobiDBLite | consensus disorder prediction | 187 | 490 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial24g02212 | K03504 | DNA polymerase delta subunit 3 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 184692 | Bial12g02354 | Bial24g02212 | |
| 363353 | Bial12g02354 | Bial24g02212 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr12:53830037 | Bial24g02212 | Bial-Chr24:52701932 | wgd |