AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02212 ATGGCTGACCTCGAAACCCTAGGTATACTCGACGAGATTCAAGCACTCGTCTCCGATAACCTTCAAGTGGTTTCTTACAAGTGGTTGAGTAGGAATTTTTCTGTGCCATCAGATACTGCTAAGAGACTGCTTCAAGAGTTTGTGGAAAAGAATGGAAGTCAACTGGAAGTTATATATTCTTTATCTGGTTGGTTGAAAAATAACCCAGAAGCTTACCATGTTAGGCTTGTTTTGGGCTCTAAACTTTCAGAAATCAAACAAGAATTTGGTGATGGTTGTTCGGTTCAAGTTTACAGTGTCCAGTCTTCTGTTCCTAAAGACGCAGCAGTTATTTGGAATGCTGAATATGTGCAATCAGAAGAGCTATTCAAGGAGCCTGCAAATGTTGTTAACTGCTTGCGTGATAATCGGTTTTGTGGTGTTTCAAATTCATTTGTGAAACGCAACACAGAGGGGGCACCGGTTATAAACAGCGCAGCTCCACAGTTAAAAAGTGTAGGAGTGCACGCACAGTCAAAAACTAGTTCTGTTAATCAAGCTCTTGACACTTCACTTGGAAAAGAAAAAAAGACTGAGCAATTAAACCCTAAACCTAATCAAGCCATAAATGTCCAAAGTGGAACTCATAAAGAGCAAGTTCCTCAAAACAAAAAGAAATTACAAAATGATAAAACCTCCTCTGGGACTTCAAGCTCATTAGCTAGCATGTGGGGCCGTGCATCTGCAAAACCAAAACCCGAGTCTGCTTCAGTGAAAACCGAAACCATCGCTCCTATTTCTAATGATGCGCAGGTGCGTGCTAACGAGTCTGTAGAGGATGAAAGCAGTGATGATGGTGATGATAATCAACAAATGAACTTCAAACGAGCGTCTAATGGTGAAGGAAATAATAATAGAAAAAGACGGGTTGTGATGGACTACTCTGATGAAGATGATAATGTTGAAGATGCAGTGAATCTTGCATCACCAGATCCACCAAAAAAGCAAGTTTTGGTTCTTGATTCCAAGAAAAGTTCTACCATTTCAGGCCTTGAAAGTAAAAATTTGGATTTTGATGAAGAAAAAGAAGTAAAGAACGAAAAGGTGAACAAGATTGACCACAAGTCTGTAAACGAGAATAAACGTCCTCACGAAAATGAAGTTAAACAGGAAGATAAAACAAGCGATGCGGTTAAAAACACGAGTAAAAAGAGAAAAGTTTTGAAGACACGAATCGATGATCGTGGGAGAGAAGTAACCGAGGTGGTTTGGGAGGATGATGAGAAAGAAACAAAACATGATGACAATACAAGAAAGGATAAAGGTGACAATAATACCACAAACAATGCTGTTGTCAACAGGCCTGTTGCAGCAGCAGCTCCTAAGAAGTCACCTGCAGTATCAAATGCTACAGGCAAAGCAGGAAACAAGAAAACCAATGCTAAGGATCCTAAACAGGGGAATATCATGTCGTTTTTCAAAAAGAAGGTTTAA 1473 39.71 MADLETLGILDEIQALVSDNLQVVSYKWLSRNFSVPSDTAKRLLQEFVEKNGSQLEVIYSLSGWLKNNPEAYHVRLVLGSKLSEIKQEFGDGCSVQVYSVQSSVPKDAAVIWNAEYVQSEELFKEPANVVNCLRDNRFCGVSNSFVKRNTEGAPVINSAAPQLKSVGVHAQSKTSSVNQALDTSLGKEKKTEQLNPKPNQAINVQSGTHKEQVPQNKKKLQNDKTSSGTSSSLASMWGRASAKPKPESASVKTETIAPISNDAQVRANESVEDESSDDGDDNQQMNFKRASNGEGNNNRKRRVVMDYSDEDDNVEDAVNLASPDPPKKQVLVLDSKKSSTISGLESKNLDFDEEKEVKNEKVNKIDHKSVNENKRPHENEVKQEDKTSDAVKNTSKKRKVLKTRIDDRGREVTEVVWEDDEKETKHDDNTRKDKGDNNTTNNAVVNRPVAAAAPKKSPAVSNATGKAGNKKTNAKDPKQGNIMSFFKKKV 490
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02212 490 MobiDBLite consensus disorder prediction 219 237 - -
Bial24g02212 490 MobiDBLite consensus disorder prediction 462 479 - -
Bial24g02212 490 Pfam DNA polymerase subunit Cdc27 23 489 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Bial24g02212 490 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 489 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER)
Bial24g02212 490 FunFam DNA polymerase delta subunit 7 149 - -
Bial24g02212 490 MobiDBLite consensus disorder prediction 294 308 - -
Bial24g02212 490 MobiDBLite consensus disorder prediction 195 211 - -
Bial24g02212 490 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 144 IPR041913 -
Bial24g02212 490 MobiDBLite consensus disorder prediction 347 435 - -
Bial24g02212 490 MobiDBLite consensus disorder prediction 187 490 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02212 K03504 DNA polymerase delta subunit 3
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Event-related genes

Select Gene_1 Gene_2 Event_name
184692 Bial12g02354 Bial24g02212
363353 Bial12g02354 Bial24g02212
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:53830037 Bial24g02212 Bial-Chr24:52701932 wgd