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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02214 ATGACTTCCACGTGTCCGGCTCCGGACGCTAGCCTCAACTACCGTCCGATTATCGGAATCGTTAGCCATCCCGGCGATGGTGCTTCCGGCAGACTTAGTAATGCGACTAATGCTTCGTATATTGCTGCTTCGTATGTGAAGTTTGTTGAATCGGCTGGTGCTAGGAAGCTCAATTTGGTCAATGGAGTGCTTTTTACAGGTGGATGGTCTAAAACTGGCCTCTACTTTGATGTCATTGAGGGAATTTTTAAGCAAGTCTTGAAGAAGAATGATGCAGTATGGCATATCACCAGAAACATTTCAAGGTATGTATCAACTGTTCAATCAGAAAGGTATCCTGTGACTGCTCTCCAGTGGCACCCAGAGAAAAATGCTTTTGAGTGGGGCTCGTCGATGATTCCACATTCAGATGATGCAATCCAAGTGACTCAACATGTTGCCAACTTTTTTGTAAGTGAGGCTAGAAAATCATTGAACAGACCACCTACTGAAGAAGTGCTTGCTAACCTTATTTACAATTATAGTCCCACTTATTGTGGGACTGCTGGGAAGGGATTTGATGAGGTTTACATCTTCTCAGAGAGTGAAAAAGTCGCAAGACTTTGA 606 43.89 MTSTCPAPDASLNYRPIIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARKLNLVNGVLFTGGWSKTGLYFDVIEGIFKQVLKKNDAVWHITRNISRYVSTVQSERYPVTALQWHPEKNAFEWGSSMIPHSDDAIQVTQHVANFFVSEARKSLNRPPTEEVLANLIYNYSPTYCGTAGKGFDEVYIFSESEKVARL 201
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02214 201 Gene3D - 12 97 IPR029062 -
Bial24g02214 201 Gene3D - 98 193 IPR029062 -
Bial24g02214 201 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 1 193 IPR015527 GO:0008242(InterPro)
Bial24g02214 201 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 98 193 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Bial24g02214 201 SUPERFAMILY Class I glutamine amidotransferase-like 105 192 IPR029062 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02214 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]
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Event-related genes

Select Gene_1 Gene_2 Event_name
184694 Bial12g02356 Bial24g02214
363355 Bial12g02356 Bial24g02214
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:53846679 Bial24g02214 Bial-Chr24:52718574 wgd