Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial24g02223 | ATGGCGTCTCATTCCTTAACTTCTTCTTCTACTTCTAATTTCAGACTCGCACTTCACTTATCCTCCAAACCCCAATTCAGATCATCTAATCGATTTCAATTCAGTCTACCCATCACCATAAGAAGCTGTTCATCGATTCGAGCTATGGGTTCTTCGTCTTCGTCATCGCAGAAACCAGACACCACCACCAATCAACAAGAGGCAGGAAACAAGGATTATAAATCTGTTAGTGACCAAGAATGGAAGAAGAAGCTAACCGGAGAACAGTTTTATGTAACTCGACAAAAGGGAACTGAAAGGGCTTTCACCGGGGAATACTGGAACACGAAGACCCCCGGGACTTACCATTGCATCTGCTGTGACACTCCACTATTCGAGTCAAGCACGAAATTTGATAGTGGAACGGGTTGGCCGTCATATTATGAGCCGATAGGAAATAATGTCAAGTCAAAACTCGATCTTTCAATCATATTTATGCCCCGACAAGAAGTTCTATGTGCAGCTTGTGATGCTCATCTTGGTCATGTGTTTGACGATGGTCCTCCTCCCACTGGCAAACGTTATTGCATTAACAGTGCTTCTCTGAAATTGAACCCAAAGTAG | 603 | 43.45 | MASHSLTSSSTSNFRLALHLSSKPQFRSSNRFQFSLPITIRSCSSIRAMGSSSSSSQKPDTTTNQQEAGNKDYKSVSDQEWKKKLTGEQFYVTRQKGTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYEPIGNNVKSKLDLSIIFMPRQEVLCAACDAHLGHVFDDGPPPTGKRYCINSASLKLNPK | 200 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial24g02223 | 200 | MobiDBLite | consensus disorder prediction | 49 | 75 | - | - | |
| Bial24g02223 | 200 | FunFam | Peptide methionine sulfoxide reductase MsrB | 70 | 200 | - | - | |
| Bial24g02223 | 200 | NCBIfam | peptide-methionine (R)-S-oxide reductase MsrB | 76 | 199 | IPR002579 | GO:0033743(InterPro) | |
| Bial24g02223 | 200 | PANTHER | METHIONINE SULFOXIDE REDUCTASE | 43 | 199 | IPR028427 | GO:0005737(PANTHER)|GO:0006979(InterPro)|GO:0016671(InterPro)|GO:0030091(InterPro)|GO:0033743(PANTHER) | |
| Bial24g02223 | 200 | Pfam | SelR domain | 80 | 198 | IPR002579 | GO:0033743(InterPro) | |
| Bial24g02223 | 200 | Gene3D | Peptide methionine sulfoxide reductase. | 56 | 200 | - | - | |
| Bial24g02223 | 200 | ProSiteProfiles | Methionine-R-sulfoxide reductase (MsrB) domain profile. | 78 | 200 | IPR002579 | GO:0033743(InterPro) | |
| Bial24g02223 | 200 | MobiDBLite | consensus disorder prediction | 49 | 72 | - | - | |
| Bial24g02223 | 200 | SUPERFAMILY | Mss4-like | 76 | 199 | IPR011057 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial24g02223 | K07305 | peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 184698 | Bial12g02364 | Bial24g02223 | |
| 363360 | Bial12g02364 | Bial24g02223 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:18867018 | Bial24g02223 | Bial-Chr24:52836712 | dispersed | |
| Bial | Bial-Chr24:52836712 | Bial4g01641 | Bial-Chr4:20728301 | dispersed | |
| Bial | Bial-Chr12:53974487 | Bial24g02223 | Bial-Chr24:52836712 | wgd |