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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02226 ATGCTAGGAGAAGTTGCAGCAGCTGTTCCCAGATCACTCTGGCCACTTCAACCTCACCGAAAACTCGAATCCTCAATACCAATATCAGTTTCAATCCCAAAAATTAGAACCCGATTTCCACAAGCAGTTAAAACTTTCTCCCTGCAAAAATATACCAATGCCCGCCTTCGTACCTTCTCGGTTAACGCTGCGGCTGCTTCTTCAGTAGGAAATGCAGACTATGCTGAAGAACCAGCTACAAATGTGAAGTTTCAGACATCATTGGATCTTCCTGGTTGCTCGACTTCGTTATCGTTGATCGGAACAGCTCCTTTGGAGAAATCATTGCAAATCGTTTTGGTTAGAGATATCGATGGAAAAACGTTCTGGGATGCTCTAGACGAGGCCTTATCACCCAGAATCAAATCACCGAATTCCATTGATAAAACAGCTCTATCCGCATTTCGTGGTATCTTTCAAAACCGACCGTTAAAGAAAGGAACTTTCATATTTTTGACATGGGTTGATCCTTCAAAAATGCTGGTTCATTTATCTAGTGGCGGGTTTCCATCGGCTGTAGAAGCTACGATTGAGTCAGAAAGCGTGACGGCTTCTCTCTTTGATAGTTCAAAAGAAGCAGAGTTCTTCACGGAATACGGTGCATTAAACTGTTACAAAATCTTGGAAATCAGAGGAAAAGGAAGTTATGGAGTCGTTTGTGCAGCACTCGACACACAAACGGGTCAAAAGGTTGCAATAAAGAAAATAACCAACATTTTTGAACATACGTCGGATGCTATTCGAATCCTGCGTGAGATTAAATTACTTAGACTCTTACGCCATCCGGATATTGTTGAAATTAAACATATTTTAATGCCACCATCAAGAAAAGATTTCAAAGATATTTATGTTGTATTTGAACTCATGGAAGCAGATCTTCATCAAGTCATAAAGGCCAATGATGACTTGACACATGAGCACCACCTTCTCGGGACACCGTCATCAGAGGCAATTTCTAAAGTCCGTAATGACAAAGCAAGAAAATACTTGACAGACTTGCCTAGAAAGGAACCGGTATCATTCTCTGAGAAGTTTCTAGAAGTTGACCCATTGGCACTTAAGCTATTGGAACGGCTATTGGCGTTTGACCCAAAAGACCGACCCACCGCAGAACAAGCCCTAGCCGACCCTTACTTCAAGGGTCTATCAAAAGTTGAGCGTGAGCCGTCATGTCAGCCATTTTCCAGACATGAGTTTGAGTTTGAGAGACGAAGGGTCACAAAAGACGATATTAGGGAATTAATATACCGGGAGATCCTTGAATATCATCCTCAGATGCTCAAAGATTACATGGCGGGCAATGATCGGTCTAGTTTTCTTTATCCTAGTGCCGTTGGCCAAGTAAAGAAGCAGTTTGCGTATTTCGAGGAAAACGATGGGAAAAGTGGGCCTGTTCTGCCTCCAGAGAGAAAACATGCTTCCCTCCCAAGGTCTACAATTTCTTCAAGCACGACTGCTCCCAAGACGCAGCAGTGTTTGGCTTCATTTGACAATCGGCCAAAAGCATCTCACGGCGGCAATATTTTTAACCCCACCACTCTTCCGCCCAAAGCGAGAGTGGCGGGTCCTGTTCTTCCATTAGAGGGTAGCCTAAACATGAAAGACGAGTATGATTCGAAAGGAATGGTTAGAAATAGAAACACGTTTGGTCTTTCTCCACATTATGCATATAGGAGCAACGGTGGGGATAGAGCACGCAGCCAACAAAAGTCAACCGACAGGAAGTTGTCATCGGGATTGGTCAATGGTGACTTGTTTTATAAGGAAGCACATGGTCAACAAAAGTCAAGTGAACCGATTGCTCTTGATGCGTAG 1854 43.37 MLGEVAAAVPRSLWPLQPHRKLESSIPISVSIPKIRTRFPQAVKTFSLQKYTNARLRTFSVNAAAASSVGNADYAEEPATNVKFQTSLDLPGCSTSLSLIGTAPLEKSLQIVLVRDIDGKTFWDALDEALSPRIKSPNSIDKTALSAFRGIFQNRPLKKGTFIFLTWVDPSKMLVHLSSGGFPSAVEATIESESVTASLFDSSKEAEFFTEYGALNCYKILEIRGKGSYGVVCAALDTQTGQKVAIKKITNIFEHTSDAIRILREIKLLRLLRHPDIVEIKHILMPPSRKDFKDIYVVFELMEADLHQVIKANDDLTHEHHLLGTPSSEAISKVRNDKARKYLTDLPRKEPVSFSEKFLEVDPLALKLLERLLAFDPKDRPTAEQALADPYFKGLSKVEREPSCQPFSRHEFEFERRRVTKDDIRELIYREILEYHPQMLKDYMAGNDRSSFLYPSAVGQVKKQFAYFEENDGKSGPVLPPERKHASLPRSTISSSTTAPKTQQCLASFDNRPKASHGGNIFNPTTLPPKARVAGPVLPLEGSLNMKDEYDSKGMVRNRNTFGLSPHYAYRSNGGDRARSQQKSTDRKLSSGLVNGDLFYKEAHGQQKSSEPIALDA 617
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02226 617 Gene3D - 71 198 IPR016088 -
Bial24g02226 617 ProSiteProfiles Protein kinase domain profile. 218 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Bial24g02226 617 FunFam Mitogen-activated protein kinase 208 311 - -
Bial24g02226 617 Gene3D Phosphorylase Kinase; domain 1 199 322 - -
Bial24g02226 617 MobiDBLite consensus disorder prediction 575 591 - -
Bial24g02226 617 Gene3D Phosphorylase Kinase; domain 1 416 438 - -
Bial24g02226 617 MobiDBLite consensus disorder prediction 472 501 - -
Bial24g02226 617 MobiDBLite consensus disorder prediction 569 591 - -
Bial24g02226 617 SUPERFAMILY Chalcone isomerase 74 202 IPR036298 GO:0016872(InterPro)
Bial24g02226 617 Pfam Protein kinase domain 219 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Bial24g02226 617 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 47 103 - GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Bial24g02226 617 Gene3D Transferase(Phosphotransferase) domain 1 323 415 - -
Bial24g02226 617 SUPERFAMILY Protein kinase-like (PK-like) 214 436 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02226 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr24:52845127 Bial3g00801 Bial-Chr3:24580059 dispersed
Bial Bial-Chr12:53990472 Bial24g02226 Bial-Chr24:52845127 transposed
Bial Bial-Chr12:53982902 Bial24g02226 Bial-Chr24:52845127 wgd
Bial Bial-Chr16:71794043 Bial24g02226 Bial-Chr24:52845127 wgd
Bial Bial-Chr24:52845127 Bial4g03407 Bial-Chr4:77555333 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bial10g03926 . 9 372 MAP Kinase gene family AT4G01370 88.798 0.0 686.0
Bial10g03873 . 64 367 MAP Kinase gene family AT3G59790 34.921 1.02e-55 188.0
Bial3g00801 . 1 567 MAP Kinase gene family AT5G19010 78.163 0.0 915.0
Bial4g01255 . 49 329 MAP Kinase gene family AT4G01370 40.426 3.17e-63 206.0
Bial2g00960 . 5 556 MAP Kinase gene family AT1G73670 70.052 0.0 814.0
Bial2g01650 . 239 363 MAP Kinase gene family AT2G18170 61.194 7.85e-48 158.0
Bial8g02463 . 1 367 MAP Kinase gene family AT2G18170 80.654 0.0 647.0
Bial13g00546 . 24 311 MAP Kinase gene family AT5G19010 30.094 5.96e-28 118.0
Bial9g00346 . 9 319 MAP Kinase gene family AT4G01370 85.209 0.0 554.0
Bial9g00182 . 64 350 MAP Kinase gene family AT3G59790 35.017 5.65e-56 187.0
Bial8g01247 . 22 311 MAP Kinase gene family AT5G19010 31.546 9.48e-32 128.0
Bial8g00528 BST 200 347 MAP Kinase gene family AT3G59790 32.948 5.94e-23 92.4
Bial22g00452 . 22 311 MAP Kinase gene family AT5G19010 30.818 1.68e-31 127.0
Bial12g02367 . 1 510 MAP Kinase gene family AT1G53510 67.181 0.0 709.0
Bial12g02996 . 23 395 MAP Kinase gene family AT2G43790 90.08 0.0 678.0
Bial19g03152 . 4 567 MAP Kinase gene family AT5G19010 75.217 0.0 871.0
Bial13g01556 . 1 363 MAP Kinase gene family AT2G18170 77.135 0.0 610.0
Bial7g03793 . 22 255 MAP Kinase gene family AT3G18040 32.8 4.21e-29 120.0
Bial4g01650 . 17 372 MAP Kinase gene family AT4G01370 74.719 0.0 568.0
Bial4g01645 . 3 369 MAP Kinase gene family AT3G45640 82.561 0.0 655.0
Bial4g00811 . 31 358 MAP Kinase gene family AT1G10210 34.884 1.86e-48 174.0
Bial4g00821 . 69 382 MAP Kinase gene family AT2G43790 34.545 1.40e-56 189.0
Bial23g02250 . 1 365 MAP Kinase gene family AT1G10210 83.562 0.0 654.0
Bial4g03407 . 2 588 MAP Kinase gene family AT1G53510 64.906 0.0 753.0
Bial4g00373 . 8 372 MAP Kinase gene family AT4G01370 87.671 0.0 684.0
Bial20g02197 . 1 365 MAP Kinase gene family AT1G10210 81.644 0.0 649.0
Bial6g03228 . 79 420 MAP Kinase gene family AT1G73670 89.181 0.0 663.0
Bial12g01983 . 22 255 MAP Kinase gene family AT3G18040 32.922 4.88e-29 120.0
Bial1g00472 . 24 311 MAP Kinase gene family AT5G19010 30.408 3.50e-28 119.0
Bial22g00029 . 64 350 MAP Kinase gene family AT3G59790 35.811 9.21e-58 192.0
Bial19g03801 . 22 311 MAP Kinase gene family AT5G19010 30.53 6.70e-30 124.0
Bial7g03906 . 22 311 MAP Kinase gene family AT5G19010 29.907 2.12e-30 125.0
Bial24g02226 . 246 495 MAP Kinase gene family AT2G42880 58.8 6.69e-82 268.0
Bial24g02739 . 25 158 MAP Kinase gene family AT5G19010 34.532 2.61e-19 86.7
Bial24g02826 . 23 395 MAP Kinase gene family AT2G43790 85.052 0.0 650.0
Bial22g01933 . 10 394 MAP Kinase gene family AT2G43790 89.922 0.0 694.0
Bial22g03518 . 9 372 MAP Kinase gene family AT4G01370 88.798 0.0 686.0
Bial11g02429 . 1 365 MAP Kinase gene family AT1G10210 83.562 0.0 655.0
Bial1g02387 . 2 575 MAP Kinase gene family AT3G14720 65.89 0.0 760.0
Bial17g00613 . 17 376 MAP Kinase gene family AT4G01370 75.278 0.0 588.0
Bial17g00603 . 5 370 MAP Kinase gene family AT3G45640 81.148 0.0 632.0
Bial21g01013 . 11 372 MAP Kinase gene family AT4G01370 75.138 0.0 586.0
Bial14g00657 . 5 568 MAP Kinase gene family AT1G73670 69.36 0.0 821.0
Bial19g01686 . 64 350 MAP Kinase gene family AT3G59790 35.811 1.70e-57 191.0
Bial10g02331 . 10 394 MAP Kinase gene family AT2G43790 89.664 0.0 693.0
Bial10g01409 . 66 306 MAP Kinase gene family AT2G43790 35.102 5.23e-42 155.0
Bial10g01399 . 66 358 MAP Kinase gene family AT2G43790 34.343 5.06e-55 183.0
Bial10g00806 . 22 311 MAP Kinase gene family AT5G19010 28.302 2.48e-21 96.3
Bial20g00751 . 24 311 MAP Kinase gene family AT5G19010 30.408 7.27e-29 121.0
Bial5g00583 . 17 376 MAP Kinase gene family AT4G01370 75.278 0.0 588.0
Bial5g00593 . 192 367 MAP Kinase gene family AT3G45640 57.955 7.17e-61 192.0
Bial5g01600 . 90 424 MAP Kinase gene family AT1G73670 37.318 5.01e-57 194.0
Bial7g01571 . 64 350 MAP Kinase gene family AT3G59790 35.811 1.76e-57 191.0
Bial14g01276 . 5 361 MAP Kinase gene family AT2G18170 77.031 0.0 596.0
Bial14g01978 . 64 345 MAP Kinase gene family AT3G59790 36.519 2.48e-55 186.0
Bial20g01120 . 22 311 MAP Kinase gene family AT5G19010 31.23 4.46e-31 126.0
Bial17g01415 . 44 370 MAP Kinase gene family AT3G45640 32.84 1.42e-55 185.0
Bial24g02014 BST,WGDA 13 307 MAP Kinase gene family AT2G01450 27.575 1.87e-21 96.7
Bial24g01850 . 69 281 MAP Kinase gene family AT2G43790 35.652 7.91e-29 116.0
Bial9g01025 . 11 372 MAP Kinase gene family AT4G01370 65.193 6.35e-177 493.0
Bial16g01447 . 17 372 MAP Kinase gene family AT4G01370 74.438 0.0 559.0
Bial16g01442 . 3 369 MAP Kinase gene family AT3G45640 82.561 0.0 655.0
Bial1g01365 . 1 363 MAP Kinase gene family AT2G18170 78.512 0.0 614.0
Bial7g03166 . 4 567 MAP Kinase gene family AT5G19010 75.043 0.0 870.0
Bial16g02801 . 2 588 MAP Kinase gene family AT1G53510 64.906 0.0 753.0
Bial14g02963 . 79 562 MAP Kinase gene family AT1G73670 77.366 0.0 782.0
Bial15g00728 . 1 129 MAP Kinase gene family AT5G19010 95.349 1.84e-83 259.0
Bial16g00343 . 8 372 MAP Kinase gene family AT4G01370 86.29 0.0 678.0
Bial12g03313 BST,WGDA 49 331 MAP Kinase gene family AT4G11330 27.628 4.45e-25 103.0
Bial20g00608 . 201 251 MAP Kinase gene family AT2G46070 54.902 8.57e-16 68.2
Bial20g00282 BST 50 330 MAP Kinase gene family AT4G01370 32.166 1.30e-28 117.0
Bial10g00274 . 104 307 MAP Kinase gene family AT1G18150 33.971 2.38e-26 107.0
Bial23g00931 . 9 510 MAP Kinase gene family AT3G18040 70.949 0.0 718.0
Bial16g00766 . 69 382 MAP Kinase gene family AT2G43790 34.545 1.40e-56 189.0
Bial16g01089 . 49 329 MAP Kinase gene family AT4G01370 40.426 3.17e-63 206.0
Bial13g02654 . 2 575 MAP Kinase gene family AT3G14720 63.727 0.0 723.0
Bial21g00510 . 8 372 MAP Kinase gene family AT4G01370 84.384 0.0 649.0
Bial21g00353 . 64 350 MAP Kinase gene family AT3G59790 35.017 2.58e-56 187.0
Bial11g01055 . 9 510 MAP Kinase gene family AT3G18040 70.949 0.0 718.0
Bial6g02220 . 64 345 MAP Kinase gene family AT3G59790 36.519 1.50e-55 186.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Bial Pkinase 1.7e-14 CL0016 PK CMGC_MAPK