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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02228 ATGGCTTCTTTGATCCAAGAAAATTGGGCACCCATCAATGATCAATATGATTTTGATAATTTAGAATCCCTAGAAATCGATGACACCCTTTTAATGTCGATACTCGATGAACCACACATTGAAGGCGAGTGTGACAATGAGAGATTATCGAGTGTAATCCGATCTTTAGAAGCTGAGATTAGTCCGATTGTAATTGAGGATCGTGATATGAGTTTGGAGCTTGAATGGAATGCTGACTGGGAAAATTCTAATCAGATGTTAACTAGTCAGAATTATTTAAAATCACATGATATAGAATATAATTGGATGGAGATGGATGATATGTACATCCAAAGTTATGAAGATGAGATGGGTGGTATAATAGAGTTTGGAGGTGTTAAAGATTATTCCCATATTTCTTATGGAAATAACATTGAGGAGCATGGTTATGGTGCTTTGTGGCAAGAAATTAACTAA 456 35.31 MASLIQENWAPINDQYDFDNLESLEIDDTLLMSILDEPHIEGECDNERLSSVIRSLEAEISPIVIEDRDMSLELEWNADWENSNQMLTSQNYLKSHDIEYNWMEMDDMYIQSYEDEMGGIIEFGGVKDYSHISYGNNIEEHGYGALWQEIN 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02228 151 PANTHER VIRUS-SPECIFIC-SIGNALING-PATHWAY REGULATED PROTEIN-RELATED 1 149 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02228 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184702 Bial12g02371 Bial24g02228
189643 Bial4g03409 Bial24g02228
363367 Bial12g02371 Bial24g02228
368941 Bial16g02803 Bial24g02228
374404 Bial24g02228 Bial4g03409
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:54005989 Bial24g02228 Bial-Chr24:52868160 wgd
Bial Bial-Chr16:71837920 Bial24g02228 Bial-Chr24:52868160 wgd
Bial Bial-Chr24:52868160 Bial4g03409 Bial-Chr4:77591313 wgd