AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02241 ATGGCCGACAAGACCACTGATGTAGTTACAAGAACCACTGGTCCATACCAAGAAGAAGATGGAAACTCTGGCAGCATCCGGACGGCTGAGACGTTGCTGAGACTGTTTCCGGTGGGTCTGTGTGTGGCGGCGTTAGTTGTCATGATTAAGGATTCTGAGACTAATGAATACGGTTCTTTATCTTACTCAAACATCACTGCTTTCAGGTTTTTGGTGCATGCTAATGGAATACTAGCTGGTTATTCGCTACTGTCGGCTGCTTTCACGGCAGTACCTCGCCCTATAACCATGTCTCGGGCTTGGACTTTCTTTCTCCTTGACCAGGTTTTAACATACCTGATATTGGCCGCGGGTGCGGTGGCGACAGAGGTGACGTTTTTGACATACAAAGGTGACGTGGCAGTGACATGGAGTGAAGCTTGTGGGACCTACGGTCATTTCTGTCGACAAGCAACAACGTCAATCATCATCACGTTTCTAGTGGTGATCTGTTACGCGTTGTTATCGCTAATCTCATCATATAGGTTGTTCAGTAAGTATGATGTACCGGTTGGGTACCGTAACAAGGGGATTGAGATAGTTGACTTTGGGAATTAA 597 46.73 MADKTTDVVTRTTGPYQEEDGNSGSIRTAETLLRLFPVGLCVAALVVMIKDSETNEYGSLSYSNITAFRFLVHANGILAGYSLLSAAFTAVPRPITMSRAWTFFLLDQVLTYLILAAGAVATEVTFLTYKGDVAVTWSEACGTYGHFCRQATTSIIITFLVVICYALLSLISSYRLFSKYDVPVGYRNKGIEIVDFGN 198
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02241 198 PANTHER CASP-LIKE PROTEIN 4A4 27 178 - -
Bial24g02241 198 NCBIfam plant integral membrane protein TIGR01569 33 174 IPR006459 -
Bial24g02241 198 MobiDBLite consensus disorder prediction 6 23 - -
Bial24g02241 198 MobiDBLite consensus disorder prediction 1 23 - -
Bial24g02241 198 Pfam Casparian strip membrane protein domain 25 164 IPR006702 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02241 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184711 Bial12g02384 Bial24g02241
189650 Bial4g03429 Bial24g02241
363389 Bial12g02384 Bial24g02241
374411 Bial24g02241 Bial4g03429
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:54175812 Bial24g02241 Bial-Chr24:53063312 wgd
Bial Bial-Chr24:53063312 Bial4g03429 Bial-Chr4:78080583 wgd