Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial24g02335 | ATGAGTCAAATCAGCAGAAAAAAGTGGGGGTTAAACCTGAAACGAACAATAATATGGCGGGTAGCTTTCCTCCGGCGATGTGGTCGATCCTTTTGGCGCCAAATTCTGGCGTGTTGGATCGGAAAATCAATCCGGTACCGGCAGCTGTTGAATAATAATAATAATAATACTGGGTCGATTCCGTTGATTCCGACGTATCATCGGGAGGCGGAGAGGACGACGGCGATTGATATGGCCACCGTCTGCCACCAGTTTCCGTCAGGGGAGTTGACGGCGTCAAGCGGCGAGATGACGTCATCTTGCGGTGGTGGTGATGAGCGTGATCAAGATGCGTCTGATTTGGTGGCATTGAAGATTTGTTTGTTGGGTGATCAACATATTGGCAAAACAAGCTTCTTGGCAAAATATGTTGGGAAAGAAAAGAATCAAGAAGAATTACCAGCTAAAGGAATACATCACATGGATAAAACCTTATGTGTCAGAGGAGCTAGAATCTCTTACAACATATGGGAAGTTAGTGGTGATGCATTGTATCCGGATGGTGATTCAAGGACTTTGATTCCTACAGCTTGTAAGGATTCTGTAGCGATCCTGTTCATGTTTGATCTAACAAGTCGCCGAACTCTTAACAGTGTTATCAACTGGCATAAGCAAGCTAGGAACTATAATCAGACCGCGATTCCAGTAATGATCGGGAGCAAATTTGATGAGTTTGTCCAGCTTCCGTTAGATTTGCAGTGGACGATCTCAAGTGAGGCACGAGCATACGCAAAGGCCATAAACGCGACTTTGTTCTTCTCAAGCGCGTCTTACAACATAAACGTAAATAAAATCTTCAAGTTTGTAACTGCAAAGCTATTTGATTTATCGTGGACTCTGGAACGTAATCTTACCGTTGGCGAGCCTATTATTGATTTCTAG | 921 | 44.08 | MSQISRKKWGLNLKRTIIWRVAFLRRCGRSFWRQILACWIGKSIRYRQLLNNNNNNTGSIPLIPTYHREAERTTAIDMATVCHQFPSGELTASSGEMTSSCGGGDERDQDASDLVALKICLLGDQHIGKTSFLAKYVGKEKNQEELPAKGIHHMDKTLCVRGARISYNIWEVSGDALYPDGDSRTLIPTACKDSVAILFMFDLTSRRTLNSVINWHKQARNYNQTAIPVMIGSKFDEFVQLPLDLQWTISSEARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLSWTLERNLTVGEPIIDF | 306 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial24g02335 | 306 | Pfam | Ras family | 118 | 285 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Bial24g02335 | 306 | ProSiteProfiles | small GTPase Rab1 family profile. | 108 | 306 | - | - | |
| Bial24g02335 | 306 | FunFam | Septum-promoting GTP-binding protein 1 | 107 | 296 | - | - | |
| Bial24g02335 | 306 | PRINTS | Transforming protein P21 ras signature | 117 | 138 | - | - | |
| Bial24g02335 | 306 | PRINTS | Transforming protein P21 ras signature | 224 | 237 | - | - | |
| Bial24g02335 | 306 | PRINTS | Transforming protein P21 ras signature | 264 | 286 | - | - | |
| Bial24g02335 | 306 | PRINTS | Transforming protein P21 ras signature | 158 | 180 | - | - | |
| Bial24g02335 | 306 | Gene3D | - | 106 | 296 | IPR027417 | - | |
| Bial24g02335 | 306 | PANTHER | - | 115 | 305 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Bial24g02335 | 306 | SMART | rab-sub-5 | 117 | 289 | - | - | |
| Bial24g02335 | 306 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 117 | 297 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial24g02335 | K07976 | Rab family, other |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 184758 | Bial12g02485 | Bial24g02335 | |
| 363463 | Bial12g02485 | Bial24g02335 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr20:68162653 | Bial24g02335 | Bial-Chr24:54045524 | dispersed | |
| Bial | Bial-Chr24:54045524 | Bial8g02968 | Bial-Chr8:71565636 | dispersed | |
| Bial | Bial-Chr12:55151939 | Bial24g02335 | Bial-Chr24:54045524 | wgd |