AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02558 ATGACGTCAGCTCAGCTTCATAACATTCCACTCGCCGGAAACAACCGTCATCCTAATCTCACCACTCATATTATTAATCTCCGATCACAAACCCTAACCACCACAACACCTCTCAATTTTACCATTTTACCCCTCCGATCAAAGCCAATTCACCGTTATTCACCATCCTGTGCCGCCATCTCCGGCGGCGGCGACGGCGCCGGCGGATCCCGCCATGGATCCGGCGGCGGAGGCGGTAACGGTAACGGCGGCGATAGTAACAGCAACAGCAATAGTAACGGAAATGGTGACAGTTTTGGTTTATTTAGTGCGTTTATTAACGGTTGGAGATCTAGGGTTTCAGCAGATCCCCAATTTCCATTCAAAGTATTAATGGAAGAAGTTGTTGGTGTAAGCGCAACCGTTTTCGGTGACATGGCATCTCGTCCGAATTTCGGTTTAAACGAGCTTGATTTCGTCTTCTCCACGTTAGTTGTAGGATCTATATTGAACTTCACTCTAATGTACTTATTAGCACCCACCATGACATCAACATCTACATCTCTTCCTTTCATATTCACAAACTCGCCACCGGGCCACATGTTCGAGCCCGGTGCGTACACGCTGGTTAACCGGTTAGGGACGTTCGTGTACAAAGGGGCCGTGTTTGCAGCCGTGGGGTTTGCGGCTGGGTTGGTTGGGACTGCGGTGTCGAATGGGTTGATTATGATAAGGAAGAAAATGGACCCGGGGTTTGAGTCGCCGAATAAGCCCCCGCCCACGGTTTTGAATGCGGTTACTTGGGCGATTCATATGGGGTTAAGTGCTAATTTGAGGTACCAAAGTTTGAATGGGATTGAGTATTTGTTGGCGAAGTGGCTGCCGCCGTTGTTGTTTAAGAGCTCGGTGTTTGGGTTGAGGTTGGCGAATAATGTTGTTGGTGGGATGACTTTTGTGATGTTGGCGAGGGTGACGGGGTCACAAAGTGCGGCTAGTGGTGAATCGAAGGTTGTCGATAAAGATGTTTCAGACGAGGAGAAGAAGTTAATTGATAACGAAGTTCCTTCCAAGTTTATGATTTTGTTTGGATTTAATGGTGTTCATGGTGACAACAATGATTCCGCGATGAAGATGGGTGTCATGATTGATGATGACAAAGAACAAATTAGCAAGAGGGAATTGTCATTTACTACTTATGGTGAAGTGGAATTTAATGGATGA 1200 46.92 MTSAQLHNIPLAGNNRHPNLTTHIINLRSQTLTTTTPLNFTILPLRSKPIHRYSPSCAAISGGGDGAGGSRHGSGGGGGNGNGGDSNSNSNSNGNGDSFGLFSAFINGWRSRVSADPQFPFKVLMEEVVGVSATVFGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSTSTSLPFIFTNSPPGHMFEPGAYTLVNRLGTFVYKGAVFAAVGFAAGLVGTAVSNGLIMIRKKMDPGFESPNKPPPTVLNAVTWAIHMGLSANLRYQSLNGIEYLLAKWLPPLLFKSSVFGLRLANNVVGGMTFVMLARVTGSQSAASGESKVVDKDVSDEEKKLIDNEVPSKFMILFGFNGVHGDNNDSAMKMGVMIDDDKEQISKRELSFTTYGEVEFNG 399
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02558 399 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 39 324 - -
Bial24g02558 399 MobiDBLite consensus disorder prediction 62 92 - -
Bial24g02558 399 Pfam Protein RETICULATA-related 112 279 IPR021825 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02558 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
184882 Bial12g02715 Bial24g02558
361531 Bial10g01267 Bial24g02558
363600 Bial12g02715 Bial24g02558
374160 Bial22g00858 Bial24g02558
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
713591 Bial Bial24g02558 Bial-Chr24:56452316 Bial9g01383 Bial-Chr9:23059711
782949 Bial Bial10g01267 Bial-Chr10:12671930 Bial24g02558 Bial-Chr24:56452316
794737 Bial Bial12g02715 Bial-Chr12:57349410 Bial24g02558 Bial-Chr24:56452316
840014 Bial Bial22g00858 Bial-Chr22:8244263 Bial24g02558 Bial-Chr24:56452316