AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02563 ATGTATTCTACTAGTGCAAAACTTGTTGATAATGCTCTTGCATCTGGAAAAATTTATGAAGATGAAGGTTTTAATCACATTAAGGAATCTTTTGCAAATAACACTTTGCACCTCATTGGATTGATGAGTGATGGAGGCGTGCACTCGCGCCTTGATCAGTTACAGTTATTGCTCAAAGGTGCTAGTGAACGCGGTGCTAAGAGGATACGCGTTCATGTACTTACTGATGGGCGTGATGTGGTGGATGGTTCAAGTGTTGATTTTGCAGAAACACTTGAAAAGGATCTTGCAGAGCTTCGTAGTAAAGGCGTCGATGCACAAATTGCTTCTGGTGGGGGGCGCATGTATGTCACCCTGGACCGTTATGAGAACGACTGGGAAGTTGTGAAACGCGGTTGGGACGCTCAGGTTCTCGGTGAAGCCCCGCACAAATTTAAAAATGCTGTTGAGGCTATAAAGAAGCTAAGGGAAGCTCCCAATGCAAATGACCAACACTTACCACCATTTGTGATTGTTGATGATAGCGGGAAGGCCGTTGGCCCCATAAACGATGGTGATGCGGTTGTCACGTTTAACTTCCGAGCTGATCGTATGACAATGCTTGCACAAGCTCTGGAGTATGAAAAGTTCGACAAGTTTGACCGAGTTAGGTTCCCGAAAATCCGCTATGCAGGAATGCTTCAATATGATGGCGAGTTGAAGCTTCCAAAGTATTATCTTGTTTCGCCTCCATTGATCGAGAGGACTTCGGGTGAATATTTGGTTTATAACGGGATCCGCACCTATGCTTGCAGTGAAACGGTCAAATTCGGTCATGTTACATTTTTCTGGAACGGGAACCGCTCTGGGTATTTTAATGCAGAGTTAGAGAAATATGTGGAAATTCCAAGTGATAGTGGAATTACATTCAATGTTCAACCAAAAATGAAGGCTTTGGAGATTGGTGAGAAGGCTAAAGAAGCCATTCTCAGTGGCAAATTTGACCAGATAAGAGTGAACATACCAAATGGTGACATGGTTGGGCATACTGGTGACATTGATGCTACCATTGTAGCCTGCAAGGCTGCTGATGATGCTGTTAAGATGATTCTTGATGCAGTAGAACAAGTGGGAGGAATATATTTGGTAACCGCAGATCACGGTAATGCAGAAGACATGGTGAAAAGAGACAAGAAGGGAGAGCCTATTTTTGCCAAGGATGGCAAAGTTCAAATCCAAACTTCTCACACTCTTCAACCGGTGCCGGTTGCAATTGGAGGCCCGGGGTTAGCGAAAGGTGTGAAGTACCGGAAGGATGTACCGGATGGTGGACTAGCAAATGTAGCTGCAACTGTGATGAATCTACATGGGTTTCTGGCTCCCGATGACTATGAGACGACACTTATTGAAGTTGATTAA 1398 44.42 MYSTSAKLVDNALASGKIYEDEGFNHIKESFANNTLHLIGLMSDGGVHSRLDQLQLLLKGASERGAKRIRVHVLTDGRDVVDGSSVDFAETLEKDLAELRSKGVDAQIASGGGRMYVTLDRYENDWEVVKRGWDAQVLGEAPHKFKNAVEAIKKLREAPNANDQHLPPFVIVDDSGKAVGPINDGDAVVTFNFRADRMTMLAQALEYEKFDKFDRVRFPKIRYAGMLQYDGELKLPKYYLVSPPLIERTSGEYLVYNGIRTYACSETVKFGHVTFFWNGNRSGYFNAELEKYVEIPSDSGITFNVQPKMKALEIGEKAKEAILSGKFDQIRVNIPNGDMVGHTGDIDATIVACKAADDAVKMILDAVEQVGGIYLVTADHGNAEDMVKRDKKGEPIFAKDGKVQIQTSHTLQPVPVAIGGPGLAKGVKYRKDVPDGGLANVAATVMNLHGFLAPDDYETTLIEVD 465
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02563 465 Gene3D - 5 241 IPR036646 GO:0004619(InterPro)|GO:0005737(InterPro)
Bial24g02563 465 Pfam BPG-independent PGAM N-terminus (iPGM-N) 9 230 IPR011258 GO:0004619(InterPro)|GO:0005737(InterPro)|GO:0006007(InterPro)|GO:0030145(InterPro)
Bial24g02563 465 SUPERFAMILY Alkaline phosphatase-like 189 451 IPR017850 -
Bial24g02563 465 CDD iPGM 5 462 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
Bial24g02563 465 Pfam Metalloenzyme superfamily 231 451 IPR006124 GO:0003824(InterPro)|GO:0046872(InterPro)
Bial24g02563 465 Gene3D Alkaline Phosphatase, subunit A 242 465 IPR017850 -
Bial24g02563 465 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2 463 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)|GO:0030145(PANTHER)|GO:0044262(PANTHER)|GO:0046537(PANTHER)
Bial24g02563 465 SUPERFAMILY 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 6 239 IPR036646 GO:0004619(InterPro)|GO:0005737(InterPro)
Bial24g02563 465 FunFam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 4 247 - -
Bial24g02563 465 PIRSF IPGAM 1 465 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02563 K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
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Event-related genes

Select Gene_1 Gene_2 Event_name
28288 Bial17g00049 Bial24g02563
32208 Bial24g02563 Bial5g01135
184886 Bial12g02720 Bial24g02563
363606 Bial12g02720 Bial24g02563
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
713595 Bial Bial24g02563 Bial-Chr24:56480226 Bial5g01135 Bial-Chr5:16273119
794742 Bial Bial12g02720 Bial-Chr12:57375248 Bial24g02563 Bial-Chr24:56480226
818171 Bial Bial17g00049 Bial-Chr17:2142033 Bial24g02563 Bial-Chr24:56480226
827263 Bial Bial19g02488 Bial-Chr19:60512110 Bial24g02563 Bial-Chr24:56480226
843882 Bial Bial24g02563 Bial-Chr24:56480226 Bial7g02493 Bial-Chr7:59345806