AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02577 ATGAAGTACGTGTTGATCACCGGCGGTGTGGTTAGCGGTCTCGGCAAAGGCGTCACCGCCAATCCATACTTGAACACAGATGCTGGTACTATGTCTCCATTTGAACATGGAGAGGTTTTCTCGGTTCTTGAGAAGGAACGAAAAGGGGATTATCTTGGAAAAACCGTGCAGGTGGTTCCACACATAACTGACGCAATTAAGGACTGGATCGAGTCGGTTTCTGTTATTCCTGTTGATGGCGAAGCGGGCCCGGCTGATGTGTGTGTGATAGAATTAGGAGGGACAGTTGGTGACATTGAGTCTATGCCCTTCATAGAGGCTTTGCGGCAGTTATTTTTTTCAAAAGGACCAGATAATTTCTGTCTTATTCATGTTAGTCTTGTACCTGTGCTTGGTGTTGTTGGTGAACAGCCATTGTTGGAAAACACAAAGCAGAAACTCTCACAATTTTGCCATGTGCCTGTTGCTAACATTCTCAATATTCATGATGTTCCAAACATATGGCATGTTCCTCTTGTACTCCGGGTCAAGATTGCAATGGTTGGGAAATATGTTGGCCTAACAGACTCTTATTTGTCTGTTGTTAAGTCCCTTCTTCATGCCTGCACTGCATTGTCATTAAAACCCTCAATTGAATGGATTGCAGCCTCTGATCTTGAAGATGAAAGTGCCCAATTGATCTTGGGCTGGAAAGGGGCAAATAGTACCGAATTTGATGAGCATGCACCCAATCCTGTTGTAATATTCATGCCTGAGGGTTCAAGAACACACATGGGAAACACAATGAGACTTGGCTCTCGAAGAACCTTATTGCAGACACCAGATTGTATCACAATCCAGAGTATGTGGATGAGCGACATCGACATCGTTATGAGGTTAGTTATTAAAATTAACTACACAATGATTAGAATTAACTACACGATGGTCCTATGTCACATGTTTATTGAATACTACATTGTCATAAAGGTGAATCCTGAGGTTGTTGGAGATTTAGAAAAGGCGGGCTTAAGATTCGTAGGGAGGGATGAAAGTGGTCAACGAATGGAGATTTTAGAACTTCCAGATCATCCATTCTATGTAGGGGTACAGTTCCATCCCGAGTACAAATCGAGGCCTGGAAAGCCTTCAGCTTTGTTTTTAGGTCTTATATTAGCAGCAACAGGGAAGTTGGAAGCATATGTGAAAACACATCAGAATGGATCTGCTTAG 1209 42.85 MKYVLITGGVVSGLGKGVTANPYLNTDAGTMSPFEHGEVFSVLEKERKGDYLGKTVQVVPHITDAIKDWIESVSVIPVDGEAGPADVCVIELGGTVGDIESMPFIEALRQLFFSKGPDNFCLIHVSLVPVLGVVGEQPLLENTKQKLSQFCHVPVANILNIHDVPNIWHVPLVLRVKIAMVGKYVGLTDSYLSVVKSLLHACTALSLKPSIEWIAASDLEDESAQLILGWKGANSTEFDEHAPNPVVIFMPEGSRTHMGNTMRLGSRRTLLQTPDCITIQSMWMSDIDIVMRLVIKINYTMIRINYTMVLCHMFIEYYIVIKVNPEVVGDLEKAGLRFVGRDESGQRMEILELPDHPFYVGVQFHPEYKSRPGKPSALFLGLILAATGKLEAYVKTHQNGSA 402
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02577 402 Pfam CTP synthase N-terminus 41 137 IPR017456 GO:0003883(InterPro)|GO:0006221(InterPro)
Bial24g02577 402 SUPERFAMILY Class I glutamine amidotransferase-like 175 387 IPR029062 -
Bial24g02577 402 Gene3D - 174 225 IPR029062 -
Bial24g02577 402 Gene3D - 226 400 IPR029062 -
Bial24g02577 402 PANTHER CTP SYNTHASE 223 280 IPR004468 GO:0003883(PANTHER)|GO:0003883(InterPro)|GO:0006221(InterPro)|GO:0006241(PANTHER)|GO:0019856(PANTHER)|GO:0042802(PANTHER)
Bial24g02577 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 175 IPR027417 -
Bial24g02577 402 Gene3D - 1 139 IPR027417 -
Bial24g02577 402 Pfam Glutamine amidotransferase class-I 325 383 IPR017926 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02577 K01937 CTP synthase [EC:6.3.4.2]
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Event-related genes

Select Gene_1 Gene_2 Event_name
184889 Bial12g02730 Bial24g02577
361540 Bial10g01285 Bial24g02577
363611 Bial12g02730 Bial24g02577
374164 Bial22g00878 Bial24g02577
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
713607 Bial Bial24g02577 Bial-Chr24:56602272 Bial2g02206 Bial-Chr2:58658918
782957 Bial Bial10g01285 Bial-Chr10:12842540 Bial24g02577 Bial-Chr24:56602272
794751 Bial Bial12g02730 Bial-Chr12:57470280 Bial24g02577 Bial-Chr24:56602272
840022 Bial Bial22g00878 Bial-Chr22:8395683 Bial24g02577 Bial-Chr24:56602272