AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02593 ATGTTTAGTTGTGGACAGATGGATAAACATAAGGAAGACGATGATAAGCGTGTTGAGTGGCTCCATTCCGAACCGTATGCTGTGGACAGGAACGTTTTTGGCGAGCCACAAAAGACGACCCGGGTTGGGGATGAATACCAGGCACAAATCCCGTCTTTAATACCAAAAAATGACGTTGACCGCTTTCAGTTTGGTCTGTCAAGTCCAGTAAACATGGCACCGGCTCCGTGTTCGTTAAATGAAAAACCGTGGAGCGCGATTGAACATGATGGTTTTGTTCTTGGTTTGTATGTATTCGGCAAGAATTTTCGCGTTGTAAACAAGTTTGTGGGGAACAAAGGAATGCCGAATGTGATGTCGTATTATTATGGGAAGTTTTATAGAAGCGGCGAGCATAAAAAATGGTCGGTGTATAAAAAGATACGAGGGCGTAAGCCCATACCTGGAAAACGGATTTTCTGTGGGTGGAGACGGCATGAGCTTTTATCTCGGTTGCTTCCTAAAGTCACAGATGAATGCAAAAATAGTTTGACACAGGTTGTTAGAGCGTTTGATGAGGGAAAACTTTCATTTGAGAAATATGTATTCGCTTTACGTGATACTGTGGGCATGAAGCTTTTAATAGAGTCCATAGCCATGGGCAAAGGAAAACAAGACCTTATTAACAAGACCAGAAGGACATTAAGAAACAAAAAACTTCAATCCACACAAGCGTCTCTTAAAACCGAACAAATTGTTGATAGTTTGAAGGACATAATCGGGCTAAGCAAAGCCCGATTACACTACCTCTTTTGGGACGTCGTGTGGCCTCTGGCTGCTGAACCCCACCTTCTTGAAGACGAAACTCTCCCGGACCAGTTGGTGGATCCGCGTGTGAAACAACGACCAGATGATGAACAAGATTTGATTAAGTACACAATCGTGGATACAAGTTTGGTCAGGCCCGTTACAGTTATTTCTGAACCTGCTGATATGCAAGCATCGACTAGTGTTTCTGAAGAAACCGAACATGACACAACAGAAGAATCTCAAAATGAAGATTTGAATCATGAAACATTGGAAGCTAAAGATTCACCAGTTTCTGAAACGAACAAGCCTGAACCAGTAAGGAAACTGAAGTTGGTTTTCAAGCACAAAACAAAACGTCAACGGGTTAATAATATAAGGATTAACAGCACGAGTGATGACGATGAGAAGAAGCGTACGAATATAGTGACGGCCTCGAACAACCCTCGAGTGGGTCCAGATACGGATGGTGATAAACAATCAGATTTAACCGAAACAACCGTGAATAACCAGACTGAGTTGTTGAGTGCTGGAACCAATGGTCAAAGGCAGAGTAGAAGAAGCCGTGTGTTAACCACCAAAGCATTGGAAGCTCTTGCCAATGAATTTTCGACCCCAAAAAAACGGAGGGGCGGGTTGGAAGATGGGACTCGTAGGCGTGTTCGAGGTAAAACCGCTCTTGTCTCGAGTTGTTGCATGCCTTGCATAAACAACTTAGGAGATGGAGTGTTTAGTGGGTCTTCACATATGGTCAGTGACTCATAA 1551 43.39 MFSCGQMDKHKEDDDKRVEWLHSEPYAVDRNVFGEPQKTTRVGDEYQAQIPSLIPKNDVDRFQFGLSSPVNMAPAPCSLNEKPWSAIEHDGFVLGLYVFGKNFRVVNKFVGNKGMPNVMSYYYGKFYRSGEHKKWSVYKKIRGRKPIPGKRIFCGWRRHELLSRLLPKVTDECKNSLTQVVRAFDEGKLSFEKYVFALRDTVGMKLLIESIAMGKGKQDLINKTRRTLRNKKLQSTQASLKTEQIVDSLKDIIGLSKARLHYLFWDVVWPLAAEPHLLEDETLPDQLVDPRVKQRPDDEQDLIKYTIVDTSLVRPVTVISEPADMQASTSVSEETEHDTTEESQNEDLNHETLEAKDSPVSETNKPEPVRKLKLVFKHKTKRQRVNNIRINSTSDDDEKKRTNIVTASNNPRVGPDTDGDKQSDLTETTVNNQTELLSAGTNGQRQSRRSRVLTTKALEALANEFSTPKKRRGGLEDGTRRRVRGKTALVSSCCMPCINNLGDGVFSGSSHMVSDS 516
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02593 516 SUPERFAMILY Homeodomain-like 82 128 IPR009057 -
Bial24g02593 516 Gene3D - 80 125 - -
Bial24g02593 516 PANTHER ATROPHIN-RELATED 12 270 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
Bial24g02593 516 MobiDBLite consensus disorder prediction 319 425 - -
Bial24g02593 516 MobiDBLite consensus disorder prediction 334 373 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02593 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184902 Bial12g02749 Bial24g02593
361555 Bial10g01324 Bial24g02593
363630 Bial12g02749 Bial24g02593
374170 Bial22g00919 Bial24g02593
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr22:8807973 Bial24g02593 Bial-Chr24:56683487 dispersed
Bial Bial-Chr22:8819449 Bial24g02593 Bial-Chr24:56683487 dispersed
Bial Bial-Chr24:56683487 Bial3g01822 Bial-Chr3:61605283 dispersed
Bial Bial-Chr10:13210566 Bial24g02593 Bial-Chr24:56683487 wgd
Bial Bial-Chr12:57556657 Bial24g02593 Bial-Chr24:56683487 wgd
Bial Bial-Chr22:8787130 Bial24g02593 Bial-Chr24:56683487 wgd