AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02609 ATGGCGACTCCTGATGTTGTTGTGCAGGCCGAACACGATCGTTTCTTTGATCACACCAAAGGCGATGCTAAATCACGAGGATTGGCGCTCGAGAAGAAAATCGAATACCTCGAGAGCTTGAACGACAGAGTTAGCAACAGACGGGCACGTAGATGGATAAATGATCGTATATTGCTGGAACTTGTACCTCGTTTGACTGGAGATGAAATCAGAGGGTTGTTTGCTCCACCACCTTTTGGTGATGAGGCCCAACCGTCAGCATTTAGCATGACAAATGTGGGAGAGTGGGACAAATTCAGGAATATAGACATGGATAAAGAGGCTGGTGCACTAGAGGCATTAAAAGGTTTATCATCAAAGAAGAAAAGCAATGTGGATGCTGATAAGATTGCTGCGTTGACCGCATGGCATAGGGTTGACTGCAGAACTCGAGAGGCGTTTCGCCGGAGTTTTCTTCCAGAACTCGTTAATGGTTTTGAGGTGAACATACGTGCCTTTGTATCAGAGGCAGCTAATGAGGAGGTTCTTGTGATGTATGCACAAGATCCGTTTCATAGGTTGTTACTTCATGGTGTTTGTGAGTTTTACAATTTGGTGTCAACAACTGAGACCGAAACCAAAGGTGCAAAGGTGTTGAAGATGACCAAAATCAAGAAGAAGAAAGCGGGTAAAAGCGAGCTCCCGACCATCACGCTTTGTGAGTTTCTGAAAATGGCAAAAGATGGTTTTTGGTAG 735 44.9 MATPDVVVQAEHDRFFDHTKGDAKSRGLALEKKIEYLESLNDRVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPFGDEAQPSAFSMTNVGEWDKFRNIDMDKEAGALEALKGLSSKKKSNVDADKIAALTAWHRVDCRTREAFRRSFLPELVNGFEVNIRAFVSEAANEEVLVMYAQDPFHRLLLHGVCEFYNLVSTTETETKGAKVLKMTKIKKKKAGKSELPTITLCEFLKMAKDGFW 244
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02609 244 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 20 242 IPR039629 -
Bial24g02609 244 Pfam R3H-associated N-terminal domain 30 149 IPR025952 -
Bial24g02609 244 SUPERFAMILY R3H domain 136 235 IPR036867 GO:0003676(InterPro)
Bial24g02609 244 Gene3D - 150 242 IPR036867 GO:0003676(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02609 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184914 Bial12g02766 Bial24g02609
361566 Bial10g01362 Bial24g02609
363647 Bial12g02766 Bial24g02609
374177 Bial22g00957 Bial24g02609
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13637955 Bial24g02609 Bial-Chr24:56841262 wgd
Bial Bial-Chr12:57732317 Bial24g02609 Bial-Chr24:56841262 wgd
Bial Bial-Chr22:9225892 Bial24g02609 Bial-Chr24:56841262 wgd