AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02610 ATGATGGGATTCAATTCAGTTTTTAAAGTTTTACAGGAGCTTTTTCCACAGCATGATTCTCGTTTCCTAAAAGCCGTGGCTTTAGAGTACCCTGATGTTGATTTAGCTGCGGAAGCAGTTCTTGCTGAGACCACGCCTGTTGTTCATGAACAACCACTTAAAGTTGGTTCTTCAAGTAATAGCCAGAGTTCACTCGGTTTCTTTGATGGTAATAGTAATGTCAAAACTGGTAAAGTTGTGACCACAACGGATCATGTAGTTGTTAATCCATTTATTCCTAAACATTCAACTGAAGATCATGCTCCAAACGTTGATGAACGCATACTTGGTGCAACAGAAGATGCTAGAAAGAGTGATACTGAAGCTAAGTATGATGGAGAAACCAATAATATTAATGCTGATACCGGGTCACCAATTGTAGTTCATGAAAATGTTTCTTTTGATGACCATAATCAAATACATGCGAAATCTGGAGGTGAAAATATCGATGACGAAACGTTACTTGTCTCAGAAAGCAACCAATTTGTAGTCATTTCTGAAATGAACTTAGCTTCAAAAGACTTTGAAAAAGATGACTCAGCAACCAACTCTGTTAATTCAGAAGATGAGTTGGTTATGAGTTCCGCACTTACTAGATCAGAGCAAATTTGTAGCACCGAATATCTTGATGAAGTTATTGAAGATGCTAAAAATAACAAGAAAATGCTTGCGTCGGCTATGAACTCAGTTATTGATTTAATGAAAGTAGTAGAATCTAAAGAGAAGGCTGCTGATCAAGCCGAGGAGGATGCCACTCGAGGTTGTTCTGATATTCTTGTCAAGGTCGACGAGCATGCAGGAGAAGTTAATGCAGAGAAAGCGATTTTAGCTACTGAATTAAAAGAGCTTCAGGTTCGTTTGTTTAATTTGTCGGACGAGAGAAACAAAGCGCTTGCAATTCTTGAGGAGATGCGTAGAACGTTAGAGGTTAGAATGGCTGCCGCTTTAGAAGAAATTGCATCAGCAGAGGAGAAAAAGTTAGAACGAGAACGGTCTGCTAGAGAAGCACTTTTGTACCAAGAAAGCCAAATGGAAAAAGTGGTTGAAGAGTCTAAGAAACTCAAGCTAGAAGCCTTGGAAAATTCTAAGTTACAAGAGTTTCTCATGGACCGTGGCCATACGATTGATATCCTACAAGGAGAGATTGCGGTCAAATGTCAGGATGTGCTACTGCTAAAAGAGAAGTTTGACAAACGAATCCCGTTATCACAAATACTTTATTCTAGCCAAACTTCATCAATCTTTGCCTCTTCAAGTTCATCTTTCGTAAGCACCACAACACCTCATGAGGCCGAGGCAGAGGTAGAGACATACGAGACCCCAAAAAAGAATTTAGAACAATATGATTCTTATGCAATTTTTGACAATAATGGTGAAGAAAAAACTATGAATTCTGATAATGGTAAAGAAAAAAGGGTTGCTAGTGAACTTAAGGGGGTTTCGGATGATGATGAATGGGAGCTATTTGATGGTAGCTGCTGA 1521 38.92 MMGFNSVFKVLQELFPQHDSRFLKAVALEYPDVDLAAEAVLAETTPVVHEQPLKVGSSSNSQSSLGFFDGNSNVKTGKVVTTTDHVVVNPFIPKHSTEDHAPNVDERILGATEDARKSDTEAKYDGETNNINADTGSPIVVHENVSFDDHNQIHAKSGGENIDDETLLVSESNQFVVISEMNLASKDFEKDDSATNSVNSEDELVMSSALTRSEQICSTEYLDEVIEDAKNNKKMLASAMNSVIDLMKVVESKEKAADQAEEDATRGCSDILVKVDEHAGEVNAEKAILATELKELQVRLFNLSDERNKALAILEEMRRTLEVRMAAALEEIASAEEKKLERERSAREALLYQESQMEKVVEESKKLKLEALENSKLQEFLMDRGHTIDILQGEIAVKCQDVLLLKEKFDKRIPLSQILYSSQTSSIFASSSSSFVSTTTPHEAEAEVETYETPKKNLEQYDSYAIFDNNGEEKTMNSDNGKEKRVASELKGVSDDDEWELFDGSC 506
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02610 506 MobiDBLite consensus disorder prediction 470 489 - -
Bial24g02610 506 ProSiteProfiles CUE domain profile. 3 45 IPR003892 GO:0043130(InterPro)
Bial24g02610 506 Coils Coil 243 263 - -
Bial24g02610 506 PANTHER OS10G0315400 PROTEIN 2 505 - -
Bial24g02610 506 MobiDBLite consensus disorder prediction 116 136 - -
Bial24g02610 506 Coils Coil 286 306 - -
Bial24g02610 506 MobiDBLite consensus disorder prediction 475 489 - -
Bial24g02610 506 Coils Coil 311 346 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02610 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184915 Bial12g02767 Bial24g02610
361568 Bial10g01366 Bial24g02610
363649 Bial12g02767 Bial24g02610
374178 Bial22g00960 Bial24g02610
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:10952970 Bial24g02610 Bial-Chr24:56846457 dispersed
Bial Bial-Chr24:56846457 Bial4g01028 Bial-Chr4:12648124 dispersed
Bial Bial-Chr10:13680557 Bial24g02610 Bial-Chr24:56846457 wgd
Bial Bial-Chr12:57737653 Bial24g02610 Bial-Chr24:56846457 wgd
Bial Bial-Chr22:9254075 Bial24g02610 Bial-Chr24:56846457 wgd