AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02622 ATGCTCAATGCTCTCAACAAAAACCTCCGGCGACTCTGCTCCAAGCTCCGGCCGCCGTCTCGCCGCCGGTCAAAGCCCAAACTCACCATCAAACGCCTCGCAAAATCAAATTCCATAAATTCCATAAATCAAGATTCATCAAACCCAAATGGGTCTGCCACTATTCACCCAAATAACCAAATGGGTGTTCAAAAAACACAAAACCCAATTCGAATTGCAACGTTTAATGCCTGTTTATTCTCAATGGCACCTGCAATTCCACCTTTGACCAATAAAGGTTCAACCTTTGACCATGGTGGGTATGATCAAGATCACACAAAGGTAGTATCCAATTGCTCTGGTTCTTTCACACATTCACGGTCAAAGTCAATGGTTGACCGGCCCAAAAGTATATTGAAACAATCATCAATGCGTTTAAGCTCCAATTGTAGCTCAGAAACTCAGTCAAAGCAGGAGAAGTTTGTAAAGTCAAAGCTGAGAGTTTCGATTAATTTACCCGATAACGAGATATCGTTGAGGCGAAACGGGCAGTTAAACTTTGTTATAGACGAGACCGAGCCCGACCCGAGTTTAAAAACCAGCAATGTGGTGAAAGGAAAGGGTGTATTGAGATCAAATAATAGTTTTTCCTCAAGGGAGGTTGAAAGTCAAAGGGGGAGTTTTCGGTCAACGAAGACGGTTCTTGAGGTTTTGAGAGAATTGGATGCAGATATATTGGCTTTACAAGATGTAAAGGCTGATGAAGAACAAGATATGAAGCCATTGTCTGATTTGGCTGCTGGCTTGGGTATGAATTATGTTTTTGCTGAAAGTTGGGCTCCTGAATTCGGTAATGCGGTTTTATCGAAATGGCCGATTAAGCGATCAAAGGTTCAGAAAATTTTTGATGATTCTGATTTCAGGTTTGTTATCTGCCCATGCTTATGA 927 41.96 MLNALNKNLRRLCSKLRPPSRRRSKPKLTIKRLAKSNSINSINQDSSNPNGSATIHPNNQMGVQKTQNPIRIATFNACLFSMAPAIPPLTNKGSTFDHGGYDQDHTKVVSNCSGSFTHSRSKSMVDRPKSILKQSSMRLSSNCSSETQSKQEKFVKSKLRVSINLPDNEISLRRNGQLNFVIDETEPDPSLKTSNVVKGKGVLRSNNSFSSREVESQRGSFRSTKTVLEVLRELDADILALQDVKADEEQDMKPLSDLAAGLGMNYVFAESWAPEFGNAVLSKWPIKRSKVQKIFDDSDFRFVICPCL 308
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02622 308 MobiDBLite consensus disorder prediction 35 61 - -
Bial24g02622 308 Gene3D Endonuclease-exonuclease-phosphatase 205 304 IPR036691 -
Bial24g02622 308 Pfam Endonuclease-Exonuclease-phosphatase family 222 299 IPR005135 GO:0003824(InterPro)
Bial24g02622 308 Coils Coil 231 251 - -
Bial24g02622 308 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 52 304 IPR051916 GO:0005783(PANTHER)|GO:0006506(PANTHER)
Bial24g02622 308 SUPERFAMILY DNase I-like 222 297 IPR036691 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02622 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184923 Bial12g02778 Bial24g02622
363663 Bial12g02778 Bial24g02622
374185 Bial22g00972 Bial24g02622
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr15:66452858 Bial24g02622 Bial-Chr24:56992173 dispersed
Bial Bial-Chr10:13838816 Bial24g02622 Bial-Chr24:56992173 wgd
Bial Bial-Chr12:57830879 Bial24g02622 Bial-Chr24:56992173 wgd
Bial Bial-Chr22:9424102 Bial24g02622 Bial-Chr24:56992173 wgd