AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial24g02715 ATGCTCCGACAAACCAACGAAGATTTATGCAAACAAGTTGAAGATCTACAAGTCAGCCGATTGAACGAGGTTGAGGAGCTTGTCTATCTTAGATGGGTCAACTCGTGTCTCAAAAACGAGTTACAAAACTCAACTTTCGTGACTTCTGAAGTAACATCAAGTCCAGCTTCTGTTGAATCAAGTGATGCAAGTTCTGACTATAGTAGTACCCAAAAAACATTAAACTTGATTAAGAAAATTAAAAAATGGCCCGTTCTTGATGAAGAAACGTGTTGGTCAGAAGGAAGAAGGCATTCAATCAGTGGAGCAAACTGCTGTCAAGAAGATCTGGTGGTGAATAAAAGAAGGCAATCTGATGGTTTTATATGTTCAATGGAAATGGAGGGTATAGCTGCAAATTCACAATTGCGTGAAGCTACAAAACTGAAAACATTTTTGGATGTTGAAAAAAGGGCGCTAAGGGTTCCTAACCCTCCTCCGAGGCCTTCTAGTTTTACTTCTAAGGAATATATAGAGGTTAGTGGTAAAGCACTACCACCACCACCGCCACCACCACCGCCTCCTCCACCACCGCCGCCGCCAAAGTTCAATGCAAGAAGTAATGGTGGAGGGGTGGTTCAACGAGCTCCGGAAGTAGTTGAGTTTTATCATTCGCTTATGAAACGGGATTCAAGAAAAGATTCCATAAATGATGGGATTTGTGATGCTTTAGATGTTAATAATGTTAGAAATAGTATGATTGGTGAAATTGAAAATCGATCTTCACATTTGCTTGCTATAAAGGAGGATGTTGAGACCCAAGGGGAATTTGTGAATTCTTTGATACATGAGGTTAACAATGCGGTTTATCCAGATATTGAAGATGTGGTGGCATTTGTTAAGTGGCTGGATGATGAACTTGGTTTTCTTGTGGATGAGAGGGCGGTTTTGAAGCACTTTGATTGGCCGGAGAAGAAAGCCGACACGTTAAGAGAAGCAGCGTTTGCATACCGAGATCTAAAGAAACTGGAGCATGAAATTTCAAATTACAAGGACAATTATCACATACCATGTGACCTGGCATTGAAGAAAATGGTTTCCATGTCTGAAAAGATGGAGCGTATTGTATATAATCTTCTTAGAACAAGAGAGCTGTTGATGCGTAATTGCAAAGAATTTCATATTCCAACTGATTGGATGCTTGATTCAGGAATATTAAACAAGATTAAGTTGGGATCGGTTAAGTTGGCTAAGAAATACTTAAAAAGAGTTGCTACAGAGCTTCAAACGAAGGGAACACATGAGAAAGATTCGTCAATGGATTATATGCTACTTCAAGGATTTGCTGGTGGATTTGATGTCGATACAATGCATGCTTTCGAGGAGCTTCGCAATGTTGCTCTTGTTTTGAACAAAAAGTAG 1401 39.83 MLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNSCLKNELQNSTFVTSEVTSSPASVESSDASSDYSSTQKTLNLIKKIKKWPVLDEETCWSEGRRHSISGANCCQEDLVVNKRRQSDGFICSMEMEGIAANSQLREATKLKTFLDVEKRALRVPNPPPRPSSFTSKEYIEVSGKALPPPPPPPPPPPPPPPPKFNARSNGGGVVQRAPEVVEFYHSLMKRDSRKDSINDGICDALDVNNVRNSMIGEIENRSSHLLAIKEDVETQGEFVNSLIHEVNNAVYPDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFAYRDLKKLEHEISNYKDNYHIPCDLALKKMVSMSEKMERIVYNLLRTRELLMRNCKEFHIPTDWMLDSGILNKIKLGSVKLAKKYLKRVATELQTKGTHEKDSSMDYMLLQGFAGGFDVDTMHAFEELRNVALVLNKK 466
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial24g02715 466 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 2 458 IPR040265 GO:0009658(PANTHER)|GO:0009707(PANTHER)
Bial24g02715 466 Coils Coil 319 346 - -
Bial24g02715 466 SUPERFAMILY Formin homology 2 domain (FH2 domain) 183 337 - -
Bial24g02715 466 MobiDBLite consensus disorder prediction 176 197 - -
Bial24g02715 466 MobiDBLite consensus disorder prediction 172 203 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial24g02715 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184981 Bial12g02876 Bial24g02715
363734 Bial12g02876 Bial24g02715
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr24:57861403 Bial6g01025 Bial-Chr6:16317199 dispersed
Bial Bial-Chr12:58866450 Bial24g02715 Bial-Chr24:57861403 wgd