AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g02870 ATGGAAGAATCACAAGAGATATTATTATTATTAAGCTCACTAACTAAACTCGGTGTTCCGATCCCAAACGAAGCTTCATCGGTTGAAGATCTAACGCCGGAGGCCTTGGTATCCATCTGCGCTCACTCGCTTCGTATAATATCCAACTCCGAGGACTCGTTTCCGGTCACGTTACCGGACTCTATGGCCGATCGGTTCACTGTGTGTACTGATCTCGCAGCTGCTGTTAAAGACCTAGGTTATATCGGCGATATGAGCTTCCATAAGTTCCTGTATCCATCTGAAGAAGACATGTATAAGTTGATTAGATTTTTGGTTGGGAGGCTCTCTGAATCATCTCGAACTGCAGTATCACCGGAAACAAAGGATAATAATGCCACTGCAACCATAAATAGTTGGGAGATATCTATCAAGGATGCTGATGATGAGGGGCAGGACTTGCGTACTCAAGTTGCAGACCTGAAACTTAGAACTGATGAAGTGGCATCACATTCAAGTCAGTGTGCTGAAGATGTTGTCACTGATAATGGTCATAGAAGTGGGGATTCTGAAACTAATAATATGGAAACTGGCAAAGGTCTAGCAGATGACACTCAGGAAGATGGTCAACAAAAACTTGACCAGTCAACTATGTCTCTTCAAGACAAATCATCCCAGACGAGTGACAAGACAGAAGCTCCAATAAATGAAGAAAATGTGTGTTCGGATGAAATGAAAATAAAATCATTGATGTTACAACAATTAGAAGAGCAACATGATTTGTTGAAAGCAGCAATGGAAATGGCTTGTGATGAACAAACTCCTTTGGAATCCTACATTACACAGCTCACCAAACAAATAGATGCAAAGAGGCACAATCTAGCAGAAATAGAGTCAAAATGGAAAGCCTTGATAAATCCTTTACAAGAGAAAAAAAGAAACTATGAAGAAGCGTTATGTGCAAAACATCCAGAGTCTCAAGAAAAACATCAACAGTGGAAAAAACTTGAGCAGGATCTGGAGTCTACATTGTCTGAAACAAATCAACGAGAAAAGGAACTTTCCAATTTGTCAGCAGAAGTTGAAAGACTGCCCAAAATGGCGACTAGAAGGTCTTACATTGAGCGGATTAAAGAGATTACTAAAAACAGCCGAAAACAAGATATTGACATAGAGCGTATTTTAAAAGATACCCGAGATCTTCAATTGGAGAGCAACATGATTCAAGAACGCCTACATCGAACGTATGCGGTGGTAGATGAAACACTTCTAAGGGAAGCGAGGAAGGATCAAGTAGGAGAGCAAGCTCACATTTTGCTGACTACCATCCACGAGAGTTTTCAAGAAATTTCTGAAAAAATCCTTGCAACCGACAGGACTCGTAGAGAACAAACAGATCTTGAAACTAAGCTTTCAAGTATTGCTACTCGAAGTTTAAACATGGACAAACTACAAGCCGATCTTGATGCCATCAGAAAAGAAAACGAATACCTTGAATCTCGTTTGGGTAATCCTCCTTAA 1500 40.4 MEESQEILLLLSSLTKLGVPIPNEASSVEDLTPEALVSICAHSLRIISNSEDSFPVTLPDSMADRFTVCTDLAAAVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRLSESSRTAVSPETKDNNATATINSWEISIKDADDEGQDLRTQVADLKLRTDEVASHSSQCAEDVVTDNGHRSGDSETNNMETGKGLADDTQEDGQQKLDQSTMSLQDKSSQTSDKTEAPINEENVCSDEMKIKSLMLQQLEEQHDLLKAAMEMACDEQTPLESYITQLTKQIDAKRHNLAEIESKWKALINPLQEKKRNYEEALCAKHPESQEKHQQWKKLEQDLESTLSETNQREKELSNLSAEVERLPKMATRRSYIERIKEITKNSRKQDIDIERILKDTRDLQLESNMIQERLHRTYAVVDETLLREARKDQVGEQAHILLTTIHESFQEISEKILATDRTRREQTDLETKLSSIATRSLNMDKLQADLDAIRKENEYLESRLGNPP 499
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g02870 499 Coils Coil 474 494 - -
Bial4g02870 499 Coils Coil 273 293 - -
Bial4g02870 499 MobiDBLite consensus disorder prediction 165 193 - -
Bial4g02870 499 Coils Coil 245 265 - -
Bial4g02870 499 Pfam CCDC22 protein coiled-coil region 129 469 IPR048348 -
Bial4g02870 499 Coils Coil 330 350 - -
Bial4g02870 499 Coils Coil 137 157 - -
Bial4g02870 499 Pfam CCDC22 protein N-terminal domain 1 110 IPR048349 -
Bial4g02870 499 PANTHER JM1 PROTEIN 168 496 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Bial4g02870 499 MobiDBLite consensus disorder prediction 204 228 - -
Bial4g02870 499 MobiDBLite consensus disorder prediction 165 229 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g02870 K23343 coiled-coil domain-containing protein 22